RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 TUBB4BP68371 445 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 CDK18Q07002 472 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 MRPL49Q13405 166 aaKnown RBP15.41■□□□□ 0.06
LMNA-223ENST00000515459 TUBB2AQ13885 445 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 PCSK7Q16549 785 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 PRR30Q53SZ7 412 aaPredicted RBP15.41■□□□□ 0.06
LMNA-223ENST00000515459 HGSNATQ68CP4 663 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 ZNF517Q6ZMY9 492 aaPredicted RBP15.41■□□□□ 0.06
LMNA-223ENST00000515459 NT5DC3Q86UY8 548 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 AMZ2Q86W34 360 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 HPS6Q86YV9 775 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 D2HGDHQ8N465 521 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 GPR150Q8NGU9 434 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 OR8K5Q8NH50 307 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 PRR7Q8TB68 274 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 BRSK1Q8TDC3 778 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 IMP4Q96G21 291 aaKnown RBP15.41■□□□□ 0.06
LMNA-223ENST00000515459 SRPK1Q96SB4 655 aaKnown RBP15.41■□□□□ 0.06
LMNA-223ENST00000515459 TUBB2BQ9BVA1 445 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 KCND1Q9NSA2 647 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 MAP10Q9P2G4 905 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 CREBBPQ92793 2442 aa15.41■□□□□ 0.06
LMNA-223ENST00000515459 OR5K3A6NET4 321 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 TMEM63AO94886 807 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 GSDMDP57764 484 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 DMPKQ09013 629 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 GPS2Q13227 327 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 RPE65Q16518 533 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 ATP13A5Q4VNC0 1218 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 ZFYVE27Q5T4F4 411 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 CCDC70Q6NSX1 233 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 CLEC17AQ6ZS10 378 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 MAMDC2Q7Z304 686 aaPredicted RBP15.4■□□□□ 0.06
LMNA-223ENST00000515459 RHOT1Q8IXI2 618 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 Q8NA96 180 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 ADAMTS17Q8TE56 1095 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 ZNF501Q96CX3 271 aaPredicted RBP15.4■□□□□ 0.06
LMNA-223ENST00000515459 CEP41Q9BYV8 373 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 NAT10Q9H0A0 1025 aaKnown RBP15.4■□□□□ 0.06
LMNA-223ENST00000515459 CBX8Q9HC52 389 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 LUZP4Q9P127 313 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 SNX7Q9UNH6 387 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 PSMD13Q9UNM6 376 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 GTF3C3Q9Y5Q9 886 aa15.4■□□□□ 0.06
LMNA-223ENST00000515459 SSU72P8A0A1W2PR75 194 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 AURKAO14965 403 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 ZBTB11O95625 1053 aaPredicted RBP15.39■□□□□ 0.05
LMNA-223ENST00000515459 TAS2R40P59535 323 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 AP1B1Q10567 949 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 GPR19Q15760 415 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 SLC14A2Q15849 920 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 TMTC4Q5T4D3 741 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 ZNF787Q6DD87 383 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 CPNE8Q86YQ8 564 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 SLC38A9Q8NBW4 561 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 FDCSPQ8NFU4 85 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 PNPLA2Q96AD5 504 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 LRFN5Q96NI6 719 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 AGAP3Q96P47 875 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 RNF157Q96PX1 679 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 NUDT9Q9BW91 350 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 MFRPQ9BY79 579 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 ZCCHC2Q9C0B9 1178 aaKnown RBP15.39■□□□□ 0.05
LMNA-223ENST00000515459 SLC25A51Q9H1U9 297 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 CHST8Q9H2A9 424 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 BPIFA1Q9NP55 256 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 HRASLS2Q9NWW9 162 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 HEY1Q9Y5J3 304 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 HIVEP3Q5T1R4 2406 aa15.39■□□□□ 0.05
LMNA-223ENST00000515459 A0A087X0T9 212 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 A0A1B0GTH6 734 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 POP7O75817 140 aaKnown RBP15.38■□□□□ 0.05
LMNA-223ENST00000515459 PROSCO94903 275 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 NDST3O95803 873 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 RAB40ALP0C0E4 278 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 FAM228BP0C875 321 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 COL8A1P27658 744 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 HMGCLP35914 325 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 XRCC4Q13426 336 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 NFKBIBQ15653 356 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 FIGNQ5HY92 759 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 FAM182AQ5T1J6 154 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 SLC6A19Q695T7 634 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 ALKBH5Q6P6C2 394 aaKnown RBP15.38■□□□□ 0.05
LMNA-223ENST00000515459 MED25Q71SY5 747 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 OOSP2Q86WS3 158 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 CARFQ8N187 725 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 TTC30BQ8N4P2 665 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 ENDOVQ8N8Q3 282 aaKnown RBP15.38■□□□□ 0.05
LMNA-223ENST00000515459 TMEM102Q8N9M5 508 aaPredicted RBP15.38■□□□□ 0.05
LMNA-223ENST00000515459 CPT1BQ92523 772 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 TADA1Q96BN2 335 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 NAP1L5Q96NT1 182 aaPredicted RBP15.38■□□□□ 0.05
LMNA-223ENST00000515459 NLNQ9BYT8 704 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 LATS2Q9NRM7 1088 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 IMP3Q9NV31 184 aaKnown RBP15.38■□□□□ 0.05
LMNA-223ENST00000515459 TCFL5Q9UL49 500 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 SPO11Q9Y5K1 396 aa15.38■□□□□ 0.05
LMNA-223ENST00000515459 DNMT3AQ9Y6K1 912 aaPredicted RBP15.38■□□□□ 0.05
LMNA-223ENST00000515459 ITPR2Q14571 2701 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms