RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ADRA1DP25100 572 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 LIMK2P53671 638 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 GSTM4Q03013 218 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 ACVR1Q04771 509 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 TPSAB1Q15661 275 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 ZRANB3Q5FWF4 1079 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 FNBP1LQ5T0N5 605 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 METRNLQ641Q3 311 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 TMEM71Q6P5X7 295 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 TMEM26Q6ZUK4 368 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 TRIM48Q8IWZ4 208 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 FBXO39Q8N4B4 442 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 BEND7Q8N7W2 519 aaPredicted RBP12.55□□□□□ -0.4
CLCN3-210ENST00000515420 ZNF248Q8NDW4 579 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 OR2L2Q8NH16 312 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 CCDC97Q96F63 343 aaPredicted RBP12.55□□□□□ -0.4
CLCN3-210ENST00000515420 AHCYL2Q96HN2 611 aaKnown RBP12.55□□□□□ -0.4
CLCN3-210ENST00000515420 SGSM3Q96HU1 749 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 OSBPL9Q96SU4 736 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 NUDT22Q9BRQ3 303 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 VPS37BQ9H9H4 285 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 RDH14Q9HBH5 336 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 ZDHHC3Q9NYG2 299 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 SCHIP1Q9P0W5 487 aaPredicted RBP12.55□□□□□ -0.4
CLCN3-210ENST00000515420 ACSL6Q9UKU0 697 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 ACSL5Q9ULC5 683 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 CELSR3Q9NYQ7 3312 aa12.55□□□□□ -0.4
CLCN3-210ENST00000515420 DSPP15924 2871 aaKnown RBP12.54□□□□□ -0.4
CLCN3-210ENST00000515420 TRBV23OR9-2A0A075B6M9 112 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 IGHV5-10-1A0A0J9YXX1 117 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 SGTAO43765 313 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 AP2A2O94973 939 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 ZSCAN5DPP0CG00 497 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 THRAP10827 490 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 RPL10P27635 214 aaKnown RBP12.54□□□□□ -0.4
CLCN3-210ENST00000515420 CSF2RBP32927 897 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 SLC19A1P41440 591 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 GRIA1P42261 906 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 MAGEA6P43360 314 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 KCNJ1P48048 391 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 BASP1P80723 227 aaKnown RBP12.54□□□□□ -0.4
CLCN3-210ENST00000515420 TMPRSS15P98073 1019 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 ITIH4Q14624 930 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 TSTD2Q5T7W7 516 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 PACS1Q6VY07 963 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 ZNF574Q6ZN55 896 aaPredicted RBP12.54□□□□□ -0.4
CLCN3-210ENST00000515420 USP53Q70EK8 1073 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 PRUNE1Q86TP1 453 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 SERPINA9Q86WD7 417 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 OR13J1Q8NGT2 312 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 HM13Q8TCT9 377 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLCN3-210ENST00000515420 CXorf40BQ96DE9 158 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 SGF29Q96ES7 293 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 IL22Q9GZX6 179 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 SEMA6CQ9H3T2 930 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 SLC40A1Q9NP59 571 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 PIH1D1Q9NWS0 290 aaKnown RBP12.54□□□□□ -0.4
CLCN3-210ENST00000515420 ZNF624Q9P2J8 865 aaPredicted RBP12.54□□□□□ -0.4
CLCN3-210ENST00000515420 SNX12Q9UMY4 172 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 TCAF1Q9Y4C2 921 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 LOXL2Q9Y4K0 774 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 MN1Q10571 1320 aaPredicted RBP12.54□□□□□ -0.4
CLCN3-210ENST00000515420 ADAMTS20P59510 1910 aa12.54□□□□□ -0.4
CLCN3-210ENST00000515420 CFAP47Q6ZTR5 3102 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 GOLGA6L10A0A0M3HER8 536 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 CCL22O00626 93 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 NVLO15381 856 aaKnown RBP12.53□□□□□ -0.4
CLCN3-210ENST00000515420 TNFSF15O95150 251 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 JMJD7P0C870 316 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 TCP1P17987 556 aaKnown RBP12.53□□□□□ -0.4
CLCN3-210ENST00000515420 FOXN2P32314 431 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 PPARGP37231 505 aaPredicted RBP12.53□□□□□ -0.4
CLCN3-210ENST00000515420 NSG1P42857 185 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 NPY2RP49146 381 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 FNTAP49354 379 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 ARSDP51689 593 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 DRG2P55039 364 aaKnown RBP12.53□□□□□ -0.4
CLCN3-210ENST00000515420 CFHR1Q03591 330 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 NFE2L1Q14494 772 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 SEPT7Q16181 437 aaKnown RBP12.53□□□□□ -0.4
CLCN3-210ENST00000515420 PCID2Q5JVF3 399 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 PHF19Q5T6S3 580 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 LYPLAL1Q5VWZ2 237 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 NKAIN2Q5VXU1 208 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 AFTPHQ6ULP2 937 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 CERS6Q6ZMG9 384 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 LRRC69Q6ZNQ3 347 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 TAS2R42Q7RTR8 314 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 AGBL5Q8NDL9 886 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 PPHLN1Q8NEY8 458 aaKnown RBP12.53□□□□□ -0.4
CLCN3-210ENST00000515420 GRK7Q8WTQ7 553 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 COG1Q8WTW3 980 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 ZFPM2Q8WW38 1151 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 MAGOHBQ96A72 148 aaKnown RBP12.53□□□□□ -0.4
CLCN3-210ENST00000515420 CCDC74BQ96LY2 380 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 TTC1Q99614 292 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 CCM2Q9BSQ5 444 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 DPH1Q9BZG8 443 aa12.53□□□□□ -0.4
CLCN3-210ENST00000515420 TRMT1Q9NXH9 659 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms