RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 NR2F2P24468 414 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 TMEM35AQ53FP2 167 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 ALS2CLQ60I27 953 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 OR7E24Q6IFN5 339 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 NAA16Q6N069 864 aaPredicted RBP4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 ZNF704Q6ZNC4 412 aaPredicted RBP4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 CEP57Q86XR8 500 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 C1orf52Q8N6N3 182 aaKnown RBP4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 SYT2Q8N9I0 419 aaPredicted RBP4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 RBM15BQ8NDT2 890 aaKnown RBP4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 SPATA20Q8TB22 786 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 TAS1R2Q8TE23 839 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 PHF21AQ96BD5 680 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 IGSF21Q96ID5 467 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 MRPL1Q9BYD6 325 aaKnown RBP4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 TXLNGYQ9BZA5 131 aa4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 CRNNQ9UBG3 495 aaPredicted RBP4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 ASTN2O75129 1339 aaPredicted RBP4.95□□□□□ -1.62
HMGCS1-207ENST00000514610 CTAGE9A4FU28 777 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 SYNDIG1LA6NDD5 238 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 SMTNL1A8MU46 457 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 SLC16A5O15375 505 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 GCNT3O95395 438 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 TPOP07202 933 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 CTAGE8P0CG41 777 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 ARSEP51690 589 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 PLIN5Q00G26 463 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 TROAPQ12815 778 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 ILF3Q12906 894 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 KRT33BQ14525 404 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 ASIC2Q16515 512 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 ADALQ6DHV7 355 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 RPUSD3Q6P087 351 aaKnown RBP4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 UNQ6126/PRO20091Q6UXV3 157 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 TUBA1AQ71U36 451 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 CTAGE4Q8IX94 777 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 KCTD6Q8NC69 237 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 WDR20Q8TBZ3 569 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 TMEM255BQ8WV15 326 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 LPGAT1Q92604 370 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 ZNF582Q96NG8 517 aaPredicted RBP4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 DGAT2Q96PD7 388 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 PKP4Q99569 1192 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 TUBA1CQ9BQE3 449 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 DENND2DQ9H6A0 471 aaPredicted RBP4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 SLA2Q9H6Q3 261 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 CHMP1AQ9HD42 196 aaPredicted RBP4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 TCP11L1Q9NUJ3 509 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 ZNF711Q9Y462 761 aa4.94□□□□□ -1.62
HMGCS1-207ENST00000514610 A0A1B0GUV1 79 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 hCG_1809904A0A1W2PP81 198 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 A0A1W2PPE2 198 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 A0A1W2PR64 198 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 A6NL46 340 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 UBE2CO00762 179 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 TO15178 435 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 PSMD10O75832 226 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 SNRNP70P08621 437 aaKnown RBP4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 GM2AP17900 193 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 ARCN1P48444 511 aaKnown RBP4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 AMPHP49418 695 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 SIRPAP78324 504 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 MELKQ14680 651 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 DHRS7BQ6IAN0 325 aaPredicted RBP4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 TMEM211Q6ICI0 200 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 SLC30A6Q6NXT4 461 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 FAM171BQ6P995 826 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 PLPPR4Q7Z2D5 763 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 GBGT1Q8N5D6 347 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 AVL9Q8NBF6 648 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 ZFAND2BQ8WV99 257 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 SNRNP27Q8WVK2 155 aaKnown RBP4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 ERLEC1Q96DZ1 483 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 FAM84BQ96KN1 310 aaPredicted RBP4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 DUX5Q96PT3 197 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 C16orf70Q9BSU1 422 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 MMP27Q9H306 513 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 GDE1Q9NZC3 331 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 TRPV2Q9Y5S1 764 aa4.93□□□□□ -1.62
HMGCS1-207ENST00000514610 LIG4P49917 911 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 ZNF132P52740 706 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 PPP5CP53041 499 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 CDH13P55290 713 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 SNRPEP62304 92 aaKnown RBP4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 GAGE2BQ13066 116 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 IL11RAQ14626 422 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 TMEM266Q2M3C6 531 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 GAGE2EQ4V326 116 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 ERMARDQ5T6L9 678 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 FAM109BQ6ICB4 259 aaPredicted RBP4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 GAGE2AQ6NT46 116 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 PLXDC2Q6UX71 529 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 KRT74Q7RTS7 529 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 DSG4Q86SJ6 1040 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 SLC9B2Q86UD5 537 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 FBXO39Q8N4B4 442 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 KBTBD3Q8NAB2 608 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 KCNH5Q8NCM2 988 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 MCUQ8NE86 351 aa4.92□□□□□ -1.62
HMGCS1-207ENST00000514610 SECTM1Q8WVN6 248 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms