RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 SIKE1Q9BRV8 207 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 TRMOQ9BU70 441 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 FAM126AQ9BYI3 521 aaPredicted RBP15.77■□□□□ 0.12
NUP54-214ENST00000514307 ILKAPQ9H0C8 392 aaPredicted RBP15.77■□□□□ 0.12
NUP54-214ENST00000514307 CD248Q9HCU0 757 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 SLCO1B3Q9NPD5 702 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 CNOT6Q9ULM6 557 aaKnown RBP15.77■□□□□ 0.12
NUP54-214ENST00000514307 ARL2BPQ9Y2Y0 163 aa15.77■□□□□ 0.12
NUP54-214ENST00000514307 DNMT3AQ9Y6K1 912 aaPredicted RBP15.77■□□□□ 0.12
NUP54-214ENST00000514307 A0A1W2PQU0 124 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 TCRBV21S2A2A0A5A6 115 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 KLHL33A6NCF5 533 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 PABPN1LA6NDY0 278 aaKnown RBP15.76■□□□□ 0.11
NUP54-214ENST00000514307 SHISA7A6NL88 538 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 FAM170BA6NMN3 283 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 GPR89AB7ZAQ6 455 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 SNX2O60749 519 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 PAK4O96013 591 aaPredicted RBP15.76■□□□□ 0.11
NUP54-214ENST00000514307 GPR89BP0CG08 455 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 MPC1LP0DKB6 136 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 HK2P52789 917 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 ZP2Q05996 745 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 TMEM92Q6UXU6 159 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 DET1Q7L5Y6 550 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 HOMEZQ8IX15 550 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 CCNYL1Q8N7R7 359 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 RASGEF1AQ8N9B8 481 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 OR2T34Q8NGX1 318 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 SLC30A3Q99726 388 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 GATA5Q9BWX5 397 aaPredicted RBP15.76■□□□□ 0.11
NUP54-214ENST00000514307 DRC3Q9H069 523 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 BTBD1Q9H0C5 482 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 PHPT1Q9NRX4 125 aaPredicted RBP15.76■□□□□ 0.11
NUP54-214ENST00000514307 ANKRD36A6QL64 1941 aa15.76■□□□□ 0.11
NUP54-214ENST00000514307 KIAA1549LQ6ZVL6 1849 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 C17orf113A0A1B0GUU1 675 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 C19orf67A6NJJ6 358 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 SLCO1B7G3V0H7 640 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 STK25O00506 426 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 RAD51BO15315 384 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 SLC16A5O15375 505 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 TSPAN12O95859 305 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 GFAPP14136 432 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 CCR7P32248 378 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 KCNC1P48547 511 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 NFKB2Q00653 900 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 OCRLQ01968 901 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 UBXN2BQ14CS0 331 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 WSCD2Q2TBF2 565 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 BCL7AQ4VC05 210 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 CDKL4Q5MAI5 379 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 TRIM67Q6ZTA4 783 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 FRA10AC1Q70Z53 315 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 CACUL1Q86Y37 369 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.75■□□□□ 0.11
NUP54-214ENST00000514307 FBXO39Q8N4B4 442 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 ELMO1Q92556 727 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 PTERQ96BW5 349 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 LENG8Q96PV6 779 aaPredicted RBP15.75■□□□□ 0.11
NUP54-214ENST00000514307 OSBPL6Q9BZF3 934 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 UNKQ9C0B0 810 aaKnown RBP15.75■□□□□ 0.11
NUP54-214ENST00000514307 CD274Q9NZQ7 290 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 SERGEFQ9UGK8 458 aa15.75■□□□□ 0.11
NUP54-214ENST00000514307 TNPO3Q9Y5L0 923 aaKnown RBP15.75■□□□□ 0.11
NUP54-214ENST00000514307 SUPT3HB4E1H0 165 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 CDC7O00311 574 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 NUAK1O60285 661 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 SUPT3HO75486 399 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 C8GP07360 202 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 HIST1H2AGP0C0S8 130 aaPredicted RBP15.74■□□□□ 0.11
NUP54-214ENST00000514307 GABRG2P18507 467 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 NDUFV2P19404 249 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 HIST1H2ADP20671 130 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 TRIM23P36406 574 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 PRLHRP49683 370 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 TPMTP51580 245 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 ADPRHP54922 357 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 HSPA14Q0VDF9 509 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 PRKAA1Q13131 559 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 RCN2Q14257 317 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 OR4D1Q15615 310 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 TSNQ15631 228 aaKnown RBP15.74■□□□□ 0.11
NUP54-214ENST00000514307 TMEM259Q4ZIN3 620 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 ACSBG2Q5FVE4 666 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 TTC23LQ6PF05 361 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 CYHR1Q6ZMK1 362 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 ZCCHC23Q6ZST2 131 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 ADGRG6Q86SQ4 1221 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 AFAP1L2Q8N4X5 818 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 GIMAP7Q8NHV1 300 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 PIWIL2Q8TC59 973 aaKnown RBP15.74■□□□□ 0.11
NUP54-214ENST00000514307 FUBP1Q96AE4 644 aaKnown RBP15.74■□□□□ 0.11
NUP54-214ENST00000514307 TMEM159Q96B96 161 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 L3HYPDHQ96EM0 354 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 COX14Q96I36 57 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 HIST1H2AHQ96KK5 128 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 ATOH8Q96SQ7 321 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 HIST1H2AJQ99878 128 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 H2AFJQ9BTM1 129 aa15.74■□□□□ 0.11
NUP54-214ENST00000514307 TEX101Q9BY14 249 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms