RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 OR14A16Q8NHC5 309 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 MAGEC3Q8TD91 643 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 DENND1AQ8TEH3 1009 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 WFIKKN2Q8TEU8 576 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 NTN5Q8WTR8 489 aaPredicted RBP4.59□□□□□ -1.67
MBD4-209ENST00000511009 ZFAND2BQ8WV99 257 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 ROBO4Q8WZ75 1007 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 MTBPQ96DY7 904 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 PRMT6Q96LA8 375 aaPredicted RBP4.59□□□□□ -1.67
MBD4-209ENST00000511009 GFI1Q99684 422 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 DNAI2Q9GZS0 605 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 ZNF541Q9H0D2 1346 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 RBM38Q9H0Z9 239 aaKnown RBP4.59□□□□□ -1.67
MBD4-209ENST00000511009 TBC1D17Q9HA65 648 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 CHCHD3Q9NX63 227 aaKnown RBP4.59□□□□□ -1.67
MBD4-209ENST00000511009 DDX43Q9NXZ2 648 aaKnown RBP4.59□□□□□ -1.67
MBD4-209ENST00000511009 DPP3Q9NY33 737 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 SNX9Q9Y5X1 595 aa4.59□□□□□ -1.67
MBD4-209ENST00000511009 TRIM64A6NGJ6 449 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 TRIM64BA6NI03 449 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 OR6C75A6NL08 312 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 CCDC188H7C350 402 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 PLK4O00444 970 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 MEIS2O14770 477 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 BAG2O95816 211 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 FGF2P09038 288 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 TMEM191BP0C7N4 346 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 PTMSP20962 102 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 AMPHP49418 695 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 CTSCP53634 463 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 YWHAHQ04917 246 aaPredicted RBP4.58□□□□□ -1.68
MBD4-209ENST00000511009 MZT1Q08AG7 82 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 GAGE2BQ13066 116 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 GPS2Q13227 327 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 SLMAPQ14BN4 828 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 ODF3L2Q3SX64 289 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 GAGE2EQ4V326 116 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 KRTCAP3Q53RY4 240 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 EFHC1Q5JVL4 640 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 PAPPA-AS1Q5QFB9 102 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 RNASEH2BQ5TBB1 312 aaKnown RBP4.58□□□□□ -1.68
MBD4-209ENST00000511009 SFMBT2Q5VUG0 894 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 GAGE2AQ6NT46 116 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 BRAT1Q6PJG6 821 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 C11orf57Q6ZUT1 292 aaPredicted RBP4.58□□□□□ -1.68
MBD4-209ENST00000511009 ZNF534Q76KX8 674 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 IRF2BP2Q7Z5L9 587 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 UNC45BQ8IWX7 931 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 ACVR1CQ8NER5 493 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 THAP6Q8TBB0 222 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 ATL1Q8WXF7 558 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 SLAMF9Q96A28 289 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 SPDL1Q96EA4 605 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 HES6Q96HZ4 224 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 FAM81BQ96LP2 452 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 RMDN2Q96LZ7 410 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 QRFPRQ96P65 431 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 OR6C1Q96RD1 312 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 OLFM1Q99784 485 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 FNDC11Q9BVV2 318 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 MRPL9Q9BYD2 267 aaKnown RBP4.58□□□□□ -1.68
MBD4-209ENST00000511009 WNT5BQ9H1J7 359 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 NOX4Q9NPH5 578 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 PRMT7Q9NVM4 692 aaPredicted RBP4.58□□□□□ -1.68
MBD4-209ENST00000511009 COQ3Q9NZJ6 369 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 RCC2Q9P258 522 aaKnown RBP4.58□□□□□ -1.68
MBD4-209ENST00000511009 DNAJB9Q9UBS3 223 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 GAGE2DQ9UEU5 116 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 INSL5Q9Y5Q6 135 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 PTGDR2Q9Y5Y4 395 aa4.58□□□□□ -1.68
MBD4-209ENST00000511009 ZNF804BA4D1E1 1349 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 A0A0U1RQK1 487 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 A0A1B0GVT2 93 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 ZNF320A2RRD8 509 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 HTR3EA5X5Y0 456 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 ANKUB1A6NFN9 424 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 SMTNL1A8MU46 457 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 TRIM77I1YAP6 450 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 TNFRSF13BO14836 293 aaPredicted RBP4.57□□□□□ -1.68
MBD4-209ENST00000511009 XRCC3O43542 346 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 MED24O75448 989 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 SRCP12931 536 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 ITGB8P26012 769 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 CD38P28907 300 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 HOXD3P31249 432 aaPredicted RBP4.57□□□□□ -1.68
MBD4-209ENST00000511009 TCF7P36402 384 aaPredicted RBP4.57□□□□□ -1.68
MBD4-209ENST00000511009 RFX2P48378 723 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 PDE1BQ01064 536 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 PPP2R5CQ13362 524 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 NFE2L1Q14494 772 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 CDC37Q16543 378 aaPredicted RBP4.57□□□□□ -1.68
MBD4-209ENST00000511009 NHSL2Q5HYW2 709 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 MOXD1Q6UVY6 613 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 SPATA19Q7Z5L4 167 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 MAP7D3Q8IWC1 876 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 KLHL7Q8IXQ5 586 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 CEP57L1Q8IYX8 460 aa4.57□□□□□ -1.68
MBD4-209ENST00000511009 MAML2Q8IZL2 1156 aaPredicted RBP4.57□□□□□ -1.68
MBD4-209ENST00000511009 C1orf52Q8N6N3 182 aaKnown RBP4.57□□□□□ -1.68
MBD4-209ENST00000511009 PAPD5Q8NDF8 572 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms