RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 MLNP12872 115 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 VCLP18206 1134 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 IVDP26440 423 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 ARNTP27540 789 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 RPL10P27635 214 aaKnown RBP11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 AKT1P31749 480 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 MAGEA3P43357 314 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 SESN2P58004 480 aaPredicted RBP11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 CRADDP78560 199 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 GPLD1P80108 840 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 NFE2L1Q14494 772 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 ITIH4Q14624 930 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 PACS1Q6VY07 963 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 USP53Q70EK8 1073 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 DET1Q7L5Y6 550 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 C17orf53Q8N3J3 647 aaPredicted RBP11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 NAT8LQ8N9F0 302 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 AVL9Q8NBF6 648 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 ZCCHC14Q8WYQ9 949 aaKnown RBP11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 SH3KBP1Q96B97 665 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 NXPE2Q96DL1 559 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 LIN37Q96GY3 246 aaPredicted RBP11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 NUDT22Q9BRQ3 303 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 OSGEPL1Q9H4B0 414 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 POLR1BQ9H9Y6 1135 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 RDH14Q9HBH5 336 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 MRM3Q9HC36 420 aaKnown RBP11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 SLC40A1Q9NP59 571 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 BFARQ9NZS9 450 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 ZMIZ1Q9ULJ6 1067 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 PCDHGA8Q9Y5G5 932 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 APC2O95996 2303 aa11.53□□□□□ -0.56
HMGXB3-203ENST00000510472 WDFY3Q8IZQ1 3526 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 PRAMEF33A0A0G2JMD5 474 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 GOLGA6L10A0A0M3HER8 536 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 PMS2P1A4D2B8 440 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 LILRA5A6NI73 299 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 OR52A4PA6NMU1 304 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 CFAP99D6REC4 459 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 TMX2-CTNND1H3BSU7 103 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 ZW10O43264 779 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 AP2A2O94973 939 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 MPOP05164 745 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 RALBP11234 206 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 MGAT1P26572 445 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 NMBRP28336 390 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 CSF2RBP32927 897 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 VPS41P49754 854 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 EPHA4P54764 986 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 DRG2P55039 364 aaKnown RBP11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 INHBCP55103 352 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 NKAIN2Q5VXU1 208 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 CAPRIN2Q6IMN6 1127 aaKnown RBP11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 AFTPHQ6ULP2 937 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 CERS6Q6ZMG9 384 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 TMEM26Q6ZUK4 368 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 TAS2R42Q7RTR8 314 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 PIM3Q86V86 326 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 ZNF761Q86XN6 746 aaPredicted RBP11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 AGGF1Q8N302 714 aaeCLIP11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 CLDN19Q8N6F1 224 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 OR4D9Q8NGE8 314 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 OR4L1Q8NH43 312 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 GRK7Q8WTQ7 553 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 DCUN1D1Q96GG9 259 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 TMEM74Q96NL1 305 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 SLC46A1Q96NT5 459 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 SLC38A3Q99624 504 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 FOXP3Q9BZS1 431 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 DDX47Q9H0S4 455 aaKnown RBP11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 SEMA6CQ9H3T2 930 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 ASCL3Q9NQ33 180 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 POT1Q9NUX5 634 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 SYBUQ9NX95 663 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 KCNK4Q9NYG8 393 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 RNF14Q9UBS8 474 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 ACSL5Q9ULC5 683 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 SOX13Q9UN79 622 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 PRSS21Q9Y6M0 314 aa11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 KMT2BQ9UMN6 2715 aaPredicted RBP11.52□□□□□ -0.57
HMGXB3-203ENST00000510472 CCDC187A0A096LP49 1063 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 IGHV5-10-1A0A0J9YXX1 117 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 SRRM3A6NNA2 597 aaPredicted RBP11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 PDZK1P1A8MUH7 402 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 BRINP1O60477 761 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 GSTM1P09488 218 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 NSG1P42857 185 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 ARCN1P48444 511 aaKnown RBP11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 LIMK2P53671 638 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 ETF1P62495 437 aaKnown RBP11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 GSTM4Q03013 218 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 PTK6Q13882 451 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 SEMA3AQ14563 771 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 SEPT7Q16181 437 aaKnown RBP11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 RPE65Q16518 533 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 AMZ1Q400G9 498 aa11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 RNASEH2BQ5TBB1 312 aaKnown RBP11.51□□□□□ -0.57
HMGXB3-203ENST00000510472 LYPLAL1Q5VWZ2 237 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms