RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 GTF2H3Q13889 308 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 C16orf72Q14CZ0 275 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 ZNF658BQ4V348 819 aaPredicted RBP13.32□□□□□ -0.28
SNF8-206ENST00000509989 PMEPA1Q969W9 287 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 CRELD1Q96HD1 420 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 TTC25Q96NG3 672 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 RANBP9Q96S59 729 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 EIF2B3Q9NR50 452 aaKnown RBP13.32□□□□□ -0.28
SNF8-206ENST00000509989 ZDHHC3Q9NYG2 299 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 IL1RAPL1Q9NZN1 696 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 CPNE7Q9UBL6 633 aa13.32□□□□□ -0.28
SNF8-206ENST00000509989 SDK2Q58EX2 2172 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 GPR89AB7ZAQ6 455 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 BANF1O75531 89 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 TCEA3O75764 348 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 POLBP06746 335 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 GPR89BP0CG08 455 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 ITIH1P19827 911 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 TPSB2P20231 275 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 ARNTP27540 789 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 HADHAP40939 763 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 MAPK9P45984 424 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 PPP1CAP62136 330 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 ZFP36L1Q07352 338 aaKnown RBP13.31□□□□□ -0.28
SNF8-206ENST00000509989 TPSAB1Q15661 275 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 ABRAXAS1Q6UWZ7 409 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 AMZ2Q86W34 360 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 OR6C4Q8NGE1 309 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 LKAAEAR1Q8TD35 194 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 RNF31Q96EP0 1072 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 MFSD3Q96ES6 412 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 RMDN2Q96LZ7 410 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 PWWP2AQ96N64 755 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 INSM2Q96T92 566 aaPredicted RBP13.31□□□□□ -0.28
SNF8-206ENST00000509989 COPS8Q99627 209 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 NRSN2Q9GZP1 204 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 WWP1Q9H0M0 922 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 SARS2Q9NP81 518 aaKnown RBP13.31□□□□□ -0.28
SNF8-206ENST00000509989 ASCL3Q9NQ33 180 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 TREX1Q9NSU2 369 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 KCNK4Q9NYG8 393 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 RALYQ9UKM9 306 aaKnown RBP13.31□□□□□ -0.28
SNF8-206ENST00000509989 LAMA5O15230 3695 aa13.31□□□□□ -0.28
SNF8-206ENST00000509989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.3□□□□□ -0.28
SNF8-206ENST00000509989 IGHV5-10-1A0A0J9YXX1 117 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 HEATR9A2RTY3 570 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 GOLGA8KD6RF30 607 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 GOLGA8TH3BQL2 631 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 ATP1B2P14415 290 aaPredicted RBP13.3□□□□□ -0.28
SNF8-206ENST00000509989 XRCC1P18887 633 aaPredicted RBP13.3□□□□□ -0.28
SNF8-206ENST00000509989 IDSP22304 550 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 PDHA2P29803 388 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 MAGEA6P43360 314 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 PREPP48147 710 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 PRLHRP49683 370 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 INHBCP55103 352 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 PDE1BQ01064 536 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 CACNG1Q06432 222 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 DMPKQ09013 629 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 RPE65Q16518 533 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 MAP9Q49MG5 647 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 BCL7AQ4VC05 210 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 LRRC8BQ6P9F7 803 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 KLHL7Q8IXQ5 586 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 NXPE2Q96DL1 559 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 CCDC74BQ96LY2 380 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 FCRL3Q96P31 734 aaPredicted RBP13.3□□□□□ -0.28
SNF8-206ENST00000509989 SLC38A3Q99624 504 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 NAPGQ99747 312 aaPredicted RBP13.3□□□□□ -0.28
SNF8-206ENST00000509989 HOMER3Q9NSC5 361 aa13.3□□□□□ -0.28
SNF8-206ENST00000509989 MGAT4DA6NG13 374 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 A8MU76 341 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 CES2O00748 559 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 CPNE6O95741 557 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 CCL4P13236 92 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 TYRP1P17643 537 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 TCP1P17987 556 aaKnown RBP13.29□□□□□ -0.28
SNF8-206ENST00000509989 ITGB6P18564 788 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 IVDP26440 423 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 ITPKBP27987 946 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 LSSP48449 732 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 GFERP55789 205 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 BIRC2Q13490 618 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 GPR18Q14330 331 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 SKIDA1Q1XH10 827 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 GPR33Q49SQ1 333 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 PCID2Q5JVF3 399 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 SNAP47Q5SQN1 464 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 PHF19Q5T6S3 580 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 METRNLQ641Q3 311 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 C19orf48Q6RUI8 117 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 SLC9B2Q86UD5 537 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 CFAP206Q8IYR0 622 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 NAT8LQ8N9F0 302 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 PPHLN1Q8NEY8 458 aaKnown RBP13.29□□□□□ -0.28
SNF8-206ENST00000509989 OR6P1Q8NGX9 317 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 OR2L2Q8NH16 312 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 RSC1A1Q92681 617 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 ULK4Q96C45 1275 aa13.29□□□□□ -0.28
SNF8-206ENST00000509989 LRRC45Q96CN5 670 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms