RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 QKIQ96PU8 341 aaKnown RBP eCLIP15.1■□□□□ 0.018e-8■■■■■ 32.5
TPM3-219ENST00000509409 C10orf88Q9H8K7 445 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 LUC7LQ9NQ29 371 aaKnown RBP15.1■□□□□ 0.01
TPM3-219ENST00000509409 SIDT1Q9NXL6 827 aaKnown RBP15.1■□□□□ 0.01
TPM3-219ENST00000509409 PSMD13Q9UNM6 376 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 TFR2Q9UP52 801 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 WDR37Q9Y2I8 494 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 PCDHB3Q9Y5E6 796 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 RPS6KL1Q9Y6S9 549 aa15.1■□□□□ 0.01
TPM3-219ENST00000509409 FLNBO75369 2602 aaKnown RBP15.1■□□□□ 0.01
TPM3-219ENST00000509409 PRR19A6NJB7 356 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 OR2AG2A6NM03 316 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 KATNA1O75449 491 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 NDUFA10O95299 355 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 DLGAP3O95886 979 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 AGTP01019 485 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 RBL1P28749 1068 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 AKT1P31749 480 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 CYLC1P35663 651 aaPredicted RBP15.09■□□□□ 0.01
TPM3-219ENST00000509409 CAPZBP47756 277 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 CTSCP53634 463 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 GEMP55040 296 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 CDC20Q12834 499 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 IL11RAQ14626 422 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 RPE65Q16518 533 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 GPRC6AQ5T6X5 926 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 DET1Q7L5Y6 550 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 GALNT6Q8NCL4 622 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 ZNF398Q8TD17 642 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 DTX3LQ8TDB6 740 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 STARD8Q92502 1023 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 STAMBPL1Q96FJ0 436 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 FICDQ9BVA6 458 aa15.09■□□□□ 0.01
TPM3-219ENST00000509409 ZNF768Q9H5H4 540 aaKnown RBP15.09■□□□□ 0.01
TPM3-219ENST00000509409 DNMT3AQ9Y6K1 912 aaPredicted RBP15.09■□□□□ 0.01
TPM3-219ENST00000509409 MACROD2A1Z1Q3 448 aa15.08■□□□□ 0
TPM3-219ENST00000509409 C2orf81A6NN90 581 aa15.08■□□□□ 0
TPM3-219ENST00000509409 GPR39O43194 453 aa15.08■□□□□ 0
TPM3-219ENST00000509409 ANXA9O76027 345 aa15.08■□□□□ 0
TPM3-219ENST00000509409 KIAA0754O94854 1291 aa15.08■□□□□ 0
TPM3-219ENST00000509409 CCNYL3P0C7X3 344 aa15.08■□□□□ 0
TPM3-219ENST00000509409 ZNF28P17035 718 aa15.08■□□□□ 0
TPM3-219ENST00000509409 CTNNA2P26232 953 aa15.08■□□□□ 0
TPM3-219ENST00000509409 DLSTP36957 453 aa15.08■□□□□ 0
TPM3-219ENST00000509409 STAT5AP42229 794 aa15.08■□□□□ 0
TPM3-219ENST00000509409 MARCKSL1P49006 195 aa15.08■□□□□ 0
TPM3-219ENST00000509409 ARL4DP49703 201 aa15.08■□□□□ 0
TPM3-219ENST00000509409 XRCC4Q13426 336 aa15.08■□□□□ 0
TPM3-219ENST00000509409 MAP7Q14244 749 aa15.08■□□□□ 0
TPM3-219ENST00000509409 NFE2L1Q14494 772 aa15.08■□□□□ 0
TPM3-219ENST00000509409 PRPSAP1Q14558 356 aa15.08■□□□□ 0
TPM3-219ENST00000509409 PTPRCAPQ14761 206 aa15.08■□□□□ 0
TPM3-219ENST00000509409 PLCL1Q15111 1095 aa15.08■□□□□ 0
TPM3-219ENST00000509409 LONRF2Q1L5Z9 754 aa15.08■□□□□ 0
TPM3-219ENST00000509409 FNBP1LQ5T0N5 605 aa15.08■□□□□ 0
TPM3-219ENST00000509409 ITPRIPL1Q6GPH6 555 aa15.08■□□□□ 0
TPM3-219ENST00000509409 C11orf63Q6NUN7 778 aa15.08■□□□□ 0
TPM3-219ENST00000509409 KLHL35Q6PF15 583 aa15.08■□□□□ 0
TPM3-219ENST00000509409 BBS12Q6ZW61 710 aa15.08■□□□□ 0
TPM3-219ENST00000509409 PRSS42Q7Z5A4 293 aa15.08■□□□□ 0
TPM3-219ENST00000509409 CCDC170Q8IYT3 715 aa15.08■□□□□ 0
TPM3-219ENST00000509409 TC2NQ8N9U0 490 aa15.08■□□□□ 0
TPM3-219ENST00000509409 APOBEC4Q8WW27 367 aaKnown RBP15.08■□□□□ 0
TPM3-219ENST00000509409 KRT35Q92764 455 aa15.08■□□□□ 0
TPM3-219ENST00000509409 ZNF71Q9NQZ8 489 aaPredicted RBP15.08■□□□□ 0
TPM3-219ENST00000509409 EPHA6Q9UF33 1036 aa15.08■□□□□ 0
TPM3-219ENST00000509409 LNPEPQ9UIQ6 1025 aa15.08■□□□□ 0
TPM3-219ENST00000509409 TUBD1Q9UJT1 453 aa15.08■□□□□ 0
TPM3-219ENST00000509409 CROTQ9UKG9 612 aa15.08■□□□□ 0
TPM3-219ENST00000509409 MRPS18BQ9Y676 258 aaKnown RBP15.08■□□□□ 0
TPM3-219ENST00000509409 ARL5AQ9Y689 179 aa15.08■□□□□ 0
TPM3-219ENST00000509409 ZFC3H1O60293 1989 aaKnown RBP15.07■□□□□ 0
TPM3-219ENST00000509409 APOC4-APOC2K7ER74 178 aa15.07■□□□□ 0
TPM3-219ENST00000509409 TERTO14746 1132 aaKnown RBP15.07■□□□□ 0
TPM3-219ENST00000509409 SPAG6O75602 509 aa15.07■□□□□ 0
TPM3-219ENST00000509409 APOC2P02655 101 aa15.07■□□□□ 0
TPM3-219ENST00000509409 LPOP22079 712 aaPredicted RBP15.07■□□□□ 0
TPM3-219ENST00000509409 FECHP22830 423 aa15.07■□□□□ 0
TPM3-219ENST00000509409 OAS2P29728 719 aaKnown RBP15.07■□□□□ 0
TPM3-219ENST00000509409 CA5AP35218 305 aa15.07■□□□□ 0
TPM3-219ENST00000509409 SEPT6Q14141 434 aa15.07■□□□□ 0
TPM3-219ENST00000509409 ATP1A1-AS1Q5TC04 95 aa15.07■□□□□ 0
TPM3-219ENST00000509409 CYB5D1Q6P9G0 228 aa15.07■□□□□ 0
TPM3-219ENST00000509409 FAM83HQ6ZRV2 1179 aaPredicted RBP15.07■□□□□ 0
TPM3-219ENST00000509409 PPP1R3BQ86XI6 285 aa15.07■□□□□ 0
TPM3-219ENST00000509409 BEND7Q8N7W2 519 aaPredicted RBP15.07■□□□□ 0
TPM3-219ENST00000509409 SIDT2Q8NBJ9 832 aaKnown RBP15.07■□□□□ 0
TPM3-219ENST00000509409 DDHD1Q8NEL9 900 aa15.07■□□□□ 0
TPM3-219ENST00000509409 KLHL6Q8WZ60 621 aa15.07■□□□□ 0
TPM3-219ENST00000509409 ZNF514Q96K75 400 aaPredicted RBP15.07■□□□□ 0
TPM3-219ENST00000509409 APOL2Q9BQE5 337 aa15.07■□□□□ 0
TPM3-219ENST00000509409 GBA3Q9H227 469 aa15.07■□□□□ 0
TPM3-219ENST00000509409 ASB8Q9H765 288 aa15.07■□□□□ 0
TPM3-219ENST00000509409 PDE7BQ9NP56 450 aa15.07■□□□□ 0
TPM3-219ENST00000509409 IMP3Q9NV31 184 aaKnown RBP15.07■□□□□ 0
TPM3-219ENST00000509409 FAM8A1Q9UBU6 413 aa15.07■□□□□ 0
TPM3-219ENST00000509409 CFAP20Q9Y6A4 193 aaKnown RBP15.07■□□□□ 0
TPM3-219ENST00000509409 BOD1L1Q8NFC6 3051 aa15.06■□□□□ 0
TPM3-219ENST00000509409 TENM4Q6N022 2769 aa15.06■□□□□ 0
TPM3-219ENST00000509409 UBA6A0AVT1 1052 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms