RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 NLE1Q9NVX2 485 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 KCNK4Q9NYG8 393 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 HACD3Q9P035 362 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 MARCH4Q9P2E8 410 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 ATXN10Q9UBB4 475 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 PISDQ9UG56 409 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 TCAF1Q9Y4C2 921 aa8.62□□□□□ -1.03
PDLIM5-213ENST00000509357 CHD6Q8TD26 2715 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ASXL3Q9C0F0 2248 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 TRBV5-4A0A0C4DH59 114 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ZCWPW2A0A1B0GU75 182 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 CCDC162PA2VCL2 907 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 PRR19A6NJB7 356 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 EIF4E1BA6NMX2 242 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 C2orf81A6NN90 581 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ERI2A8K979 691 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 PDZK1P1A8MUH7 402 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 STX7O15400 261 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 KLK10O43240 276 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 NUAK1O60285 661 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ZNF189O75820 626 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 DXOO77932 396 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 CDK14O94921 469 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 EML2O95834 649 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 C1QAP02745 245 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 HGFP14210 728 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ZNF8P17098 575 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 LPOP22079 712 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 CCKBRP32239 447 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 SPAM1P38567 509 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 MAPK9P45984 424 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 GPR3P46089 330 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ARCN1P48444 511 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 MAPK10P53779 464 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 DHX9Q08211 1270 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 CDH17Q12864 832 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 NFATC2Q13469 925 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 SEPT6Q14141 434 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 DHX34Q14147 1143 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 PPP1R7Q15435 360 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 HP1BP3Q5SSJ5 553 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 TSTD2Q5T7W7 516 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 NKAIN2Q5VXU1 208 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 C11orf96Q7Z7L8 435 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ADGRG6Q86SQ4 1221 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 LDB1Q86U70 411 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 SLC9B2Q86UD5 537 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ZNF761Q86XN6 746 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 TRAPPC5Q8IUR0 188 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 TRIM48Q8IWZ4 208 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 SPACA3Q8IXA5 215 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 MMGT1Q8N4V1 131 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 OR10G6Q8NH81 332 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 SEC14L1Q92503 715 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 SH3KBP1Q96B97 665 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 LIN37Q96GY3 246 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 CDKN2AIPNLQ96HQ2 116 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 PPP1R2P1Q96PQ5 205 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 PLEKHG4BQ96PX9 1271 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 CMKLR1Q99788 373 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ERP44Q9BS26 406 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ZCCHC2Q9C0B9 1178 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 KLC4Q9NSK0 619 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ZDHHC18Q9NUE0 388 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 SLC17A6Q9P2U8 582 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 SLC23A2Q9UGH3 650 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 ASIC3Q9UHC3 531 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 DNAJC16Q9Y2G8 782 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 LOXL2Q9Y4K0 774 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 PCDHGA8Q9Y5G5 932 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 PRSS21Q9Y6M0 314 aa8.61□□□□□ -1.03
PDLIM5-213ENST00000509357 GLYATL1P3A0A0U1RQE8 302 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 PMS2P1A4D2B8 440 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 EFCAB8A8MWE9 144 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 GPR89AB7ZAQ6 455 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 GOLGA8KD6RF30 607 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 E7EVH7 732 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 GOLGA8TH3BQL2 631 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 H7C0S8 307 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 KMOO15229 486 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 PPM1DO15297 605 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 PSMD3O43242 534 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 VEGFDO43915 354 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 SRP72O76094 671 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 PRAMEF1O95521 474 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 GAS8O95995 478 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 ITGA2BP08514 1039 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 GPR89BP0CG08 455 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 VCLP18206 1134 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 MPSTP25325 297 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 CD1CP29017 333 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 AKT1P31749 480 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 MC4RP32245 332 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 PDX1P52945 283 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 CTSCP53634 463 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 CXADRP78310 365 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 HHEXQ03014 270 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 SEPT7Q16181 437 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 ZNF658BQ4V348 819 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 ZNF789Q5FWF6 425 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms