RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 NME5P56597 212 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 GSTM4Q03013 218 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 SULT2A1Q06520 285 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 ACOX1Q15067 660 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 ZNF470Q6ECI4 717 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 NAPRTQ6XQN6 538 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 DET1Q7L5Y6 550 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 NET1Q7Z628 596 aaPredicted RBP8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 DENND6AQ8IWF6 608 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 SKA2Q8WVK7 121 aaPredicted RBP8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 RLN3Q8WXF3 142 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 SERAC1Q96JX3 654 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 ADNPQ9H2P0 1102 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 PDFQ9HBH1 243 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 PLGRKTQ9HBL7 147 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 RABL2AQ9UBK7 228 aaPredicted RBP8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 MUTYHQ9UIF7 546 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 STOML2Q9UJZ1 356 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 POU2F3Q9UKI9 436 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 SARDHQ9UL12 918 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 POMPQ9Y244 141 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 OR51B4Q9Y5P0 310 aa8.59□□□□□ -1.03
LIMCH1-209ENST00000509277 DENND4CQ5VZ89 1909 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 A0A1W2PP55 124 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 TCRBV9S1A1TA0A576 114 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 CXorf49A8MYA2 514 aaPredicted RBP8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 FKBP6O75344 327 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 NDST3O95803 873 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 THRAP10827 490 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 CASP2P42575 452 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 ARPC4P59998 168 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 PFKPQ01813 784 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 FCHO2Q0JRZ9 810 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 TDGQ13569 410 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 PLCL1Q15111 1095 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 AFMIDQ63HM1 303 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 PACS1Q6VY07 963 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 CDHR3Q6ZTQ4 885 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 BPIFB6Q8NFQ5 453 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 OR2A12Q8NGT7 310 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 OR8D1Q8WZ84 308 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 HDAC2Q92769 488 aaKnown RBP8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 TAMM41Q96BW9 452 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 PTCD3Q96EY7 689 aaKnown RBP8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 EBNA1BP2Q99848 306 aaKnown RBP8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 EHD1Q9H4M9 534 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 SUV39H2Q9H5I1 410 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 PIF1Q9H611 641 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 PNPOQ9NVS9 261 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 PKP3Q9Y446 797 aa8.59□□□□□ -1.04
LIMCH1-209ENST00000509277 ATG2AQ2TAZ0 1938 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 TMEM221A6NGB7 291 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 EIF3FO00303 357 aaPredicted RBP8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 HNRNPCL1O60812 293 aaKnown RBP8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 ECI2O75521 394 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 POP4O95707 220 aaKnown RBP8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 DCNP07585 359 aaKnown RBP8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 MMP2P08253 660 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 ACADMP11310 421 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 SEPHS1P49903 392 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 GPX6P59796 221 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 MADCAM1Q13477 382 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 MTX3Q5HYI7 312 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 ARTNQ5T4W7 220 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 ATG16L1Q676U5 607 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 KIAA1211LQ6NV74 962 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 GDPD4Q6W3E5 623 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 ZNF534Q76KX8 674 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 OR14C36Q8NHC7 312 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 LZICQ8WZA0 190 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 EXT2Q93063 718 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 DGCR6LQ9BY27 220 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 SOX17Q9H6I2 414 aaPredicted RBP8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 NDUFA13Q9P0J0 144 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 IL36AQ9UHA7 158 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 FKBPLQ9UIM3 349 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 TMEM98Q9Y2Y6 226 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 BDP1A6H8Y1 2624 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 KIF26AQ9ULI4 1882 aaPredicted RBP8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 TMEM265A0A087WTH1 108 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 C2orf81A6NN90 581 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 ANKRD66B4E2M5 251 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 MID1O15344 667 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 TPSB2P20231 275 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 CD97P48960 835 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 PPM1FP49593 454 aaPredicted RBP8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 MPP1Q00013 466 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 TPSAB1Q15661 275 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 PKN3Q6P5Z2 889 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 DOK6Q6PKX4 331 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 C4orf22Q6V702 233 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 TMEM26Q6ZUK4 368 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 KCNMB4Q86W47 210 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 SPATA6LQ8N4H0 392 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 CDKL2Q92772 493 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 RTP4Q96DX8 246 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 RMND5BQ96G75 393 aaPredicted RBP8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 SIGLEC10Q96LC7 697 aa8.58□□□□□ -1.04
LIMCH1-209ENST00000509277 FCRL3Q96P31 734 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms