RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 NME5P56597 212 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 PRKCQQ04759 706 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 DCTN2Q13561 401 aaKnown RBP10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 SHHQ15465 462 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 TEAD2Q15562 447 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 TAF1AQ15573 450 aaPredicted RBP10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 KIF19Q2TAC6 998 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 NHSL2Q5HYW2 709 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 C9orf50Q5SZB4 431 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 LCN8Q6JVE9 175 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 SPATA19Q7Z5L4 167 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 CROCCP3Q8IVE0 287 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 CPXM2Q8N436 756 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 TFAP2CQ92754 450 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 RPL10LQ96L21 214 aaKnown RBP10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 ADGRE3Q9BY15 652 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 YTHDF1Q9BYJ9 559 aaKnown RBP10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 SEMA6AQ9H2E6 1030 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 ALG9Q9H6U8 611 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 NOL11Q9H8H0 719 aaKnown RBP10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 BPIFA1Q9NP55 256 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 POLR3BQ9NW08 1133 aaPredicted RBP10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 ACTR3BQ9P1U1 418 aa10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 INTS6Q9UL03 887 aaKnown RBP10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 CNOT6Q9ULM6 557 aaKnown RBP10.9□□□□□ -0.66
SH3RF1-203ENST00000508685 A0A0J9YYE9 177 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 TRIM64CA6NLI5 447 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 C2orf81A6NN90 581 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 GRM6O15303 877 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 AKAP10O43572 662 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 MOSPD3O75425 235 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 ALPIP09923 528 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 CD1DP15813 335 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 CES1P23141 567 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 CTSOP43234 321 aaPredicted RBP10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 STK19P49842 368 aaPredicted RBP10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 NUP107P57740 925 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 NTHL1P78549 312 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 TIAL1Q01085 375 aaKnown RBP eCLIP10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 RPS6KA2Q15349 733 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 PPP1R3AQ16821 1122 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 AASDHQ4L235 1098 aaPredicted RBP10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 MPPE1Q53F39 396 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 ZNF697Q5TEC3 545 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 KANK2Q63ZY3 851 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 AMIGO2Q86SJ2 522 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 TERB1Q8NA31 727 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 TRIM54Q9BYV2 358 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 TNKS2Q9H2K2 1166 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 AKTIPQ9H8T0 292 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 ABCB8Q9NUT2 735 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 OLAHQ9NV23 265 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 HCFC2Q9Y5Z7 792 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 MYOFQ9NZM1 2061 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 UBA6A0AVT1 1052 aaPredicted RBP10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 DHRS12A0PJE2 317 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 H3BSA7 217 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 UBFD1O14562 309 aaKnown RBP10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 PER2O15055 1255 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 FZD6O60353 706 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 NPPAP01160 153 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 RHOP08100 348 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 CTPS1P17812 591 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 MYF6P23409 242 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 HLA-FP30511 346 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 GRIA3P42263 894 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 RALGDSQ12967 914 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 GK3PQ14409 553 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 TYSND1Q2T9J0 566 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 PLEKHG6Q3KR16 790 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 MTX3Q5HYI7 312 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 MPP7Q5T2T1 576 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 FAM109BQ6ICB4 259 aaPredicted RBP10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 OGFOD2Q6N063 350 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 RETSATQ6NUM9 610 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 PRR23BQ6ZRT6 265 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 TMEM25Q86YD3 366 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 FUNDC1Q8IVP5 155 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 PIANPQ8IYJ0 282 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 CANT1Q8WVQ1 401 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 HERVK_113Q902F9 699 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 EID2BQ96D98 161 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 CENPNQ96H22 339 aaPredicted RBP10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 NUSAP1Q9BXS6 441 aaKnown RBP10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 CAAP1Q9H8G2 361 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 SDR39U1Q9NRG7 319 aaPredicted RBP10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 EVLQ9UI08 416 aaPredicted RBP10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 FKBPLQ9UIM3 349 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 PCDHGB4Q9UN71 923 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 ZNF510Q9Y2H8 683 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 PCDHGB5Q9Y5G0 923 aa10.89□□□□□ -0.67
SH3RF1-203ENST00000508685 HELZP42694 1942 aaKnown RBP10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 A0A1B0GVG6 124 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 SYCE1LA8MT33 242 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 GRXCR1A8MXD5 290 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 ZNF821O75541 412 aaPredicted RBP10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 LPOP22079 712 aaPredicted RBP10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 PLK1P53350 603 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 HPCAP84074 193 aa10.88□□□□□ -0.67
SH3RF1-203ENST00000508685 TBCELQ5QJ74 424 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms