RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CASC3O15234 703 aaKnown RBP19.52■□□□□ 0.72
SFXN1-209ENST00000508290 NVLO15381 856 aaKnown RBP19.52■□□□□ 0.72
SFXN1-209ENST00000508290 GPR39O43194 453 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 KRT37O76014 449 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 THRAP10827 490 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 ACRV1P26436 265 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 CXCR5P32302 372 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 RPL22P35268 128 aaKnown RBP19.52■□□□□ 0.72
SFXN1-209ENST00000508290 PPM1FP49593 454 aaPredicted RBP19.52■□□□□ 0.72
SFXN1-209ENST00000508290 PRLHRP49683 370 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 TMPRSS15P98073 1019 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 LYPLAL1Q5VWZ2 237 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 METRNLQ641Q3 311 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 TMEM26Q6ZUK4 368 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 PLXDC1Q8IUK5 500 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 REXO1L1PQ8IX06 675 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 ZFPM2Q8WW38 1151 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 PDLIM2Q96JY6 352 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 DCBLD2Q96PD2 775 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 SEMA6CQ9H3T2 930 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 AP2A2O94973 939 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 ATP1B2P14415 290 aaPredicted RBP19.51■□□□□ 0.71
SFXN1-209ENST00000508290 CD82P27701 267 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 PPARGP37231 505 aaPredicted RBP19.51■□□□□ 0.71
SFXN1-209ENST00000508290 SLC19A1P41440 591 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 ITIH4Q14624 930 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 SEPT7Q16181 437 aaKnown RBP19.51■□□□□ 0.71
SFXN1-209ENST00000508290 ZRANB3Q5FWF4 1079 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 BROXQ5VW32 411 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 ZNF449Q6P9G9 518 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 KLHL35Q6PF15 583 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 FOXR1Q6PIV2 292 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 TAB3Q8N5C8 712 aaPredicted RBP19.51■□□□□ 0.71
SFXN1-209ENST00000508290 PRELID2Q8N945 189 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 HM13Q8TCT9 377 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 KCNE4Q8WWG9 221 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 SGF29Q96ES7 293 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 SGSM3Q96HU1 749 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 CCDC74BQ96LY2 380 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 CCM2Q9BSQ5 444 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 SLC40A1Q9NP59 571 aa19.51■□□□□ 0.71
SFXN1-209ENST00000508290 ZNF624Q9P2J8 865 aaPredicted RBP19.51■□□□□ 0.71
SFXN1-209ENST00000508290 GOLGA6L10A0A0M3HER8 536 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 PGRMC1O00264 195 aaKnown RBP19.5■□□□□ 0.71
SFXN1-209ENST00000508290 TOX3O15405 576 aaPredicted RBP19.5■□□□□ 0.71
SFXN1-209ENST00000508290 BRAFP15056 766 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 RPL10P27635 214 aaKnown RBP19.5■□□□□ 0.71
SFXN1-209ENST00000508290 CSF2RBP32927 897 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 CSTF2P33240 577 aaKnown RBP eCLIP19.5■□□□□ 0.71
SFXN1-209ENST00000508290 NSG1P42857 185 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 BASP1P80723 227 aaKnown RBP19.5■□□□□ 0.71
SFXN1-209ENST00000508290 SARNPP82979 210 aaKnown RBP19.5■□□□□ 0.71
SFXN1-209ENST00000508290 ACVR1Q04771 509 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 NKAIN2Q5VXU1 208 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 AFTPHQ6ULP2 937 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 CERS6Q6ZMG9 384 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 ZNF574Q6ZN55 896 aaPredicted RBP19.5■□□□□ 0.71
SFXN1-209ENST00000508290 TMPRSS9Q7Z410 1059 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 SERPINA9Q86WD7 417 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 PPHLN1Q8NEY8 458 aaKnown RBP19.5■□□□□ 0.71
SFXN1-209ENST00000508290 IL22Q9GZX6 179 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 SCHIP1Q9P0W5 487 aaPredicted RBP19.5■□□□□ 0.71
SFXN1-209ENST00000508290 PISDQ9UG56 409 aa19.5■□□□□ 0.71
SFXN1-209ENST00000508290 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.49■□□□□ 0.71
SFXN1-209ENST00000508290 UBXN7O94888 489 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 ANKRD34CP0C6C1 535 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 SLC35G4P0C7Q5 338 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 TPSB2P20231 275 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 CA5AP35218 305 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 NPY2RP49146 381 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 DRG2P55039 364 aaKnown RBP19.49■□□□□ 0.71
SFXN1-209ENST00000508290 RAB15P59190 212 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 RPA4Q13156 261 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 C16orf72Q14CZ0 275 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 TPSAB1Q15661 275 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 TSTD2Q5T7W7 516 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 PACS1Q6VY07 963 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 DET1Q7L5Y6 550 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 TAS2R42Q7RTR8 314 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 ACTRT1Q8TDG2 376 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 NCSTNQ92542 709 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 KCNF1Q9H3M0 494 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 LHX6Q9UPM6 363 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 PCDHGA3Q9Y5H0 932 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 HEBP2Q9Y5Z4 205 aa19.49■□□□□ 0.71
SFXN1-209ENST00000508290 MN1Q10571 1320 aaPredicted RBP19.49■□□□□ 0.71
SFXN1-209ENST00000508290 ZFC3H1O60293 1989 aaKnown RBP19.48■□□□□ 0.71
SFXN1-209ENST00000508290 B4E171 279 aa19.48■□□□□ 0.71
SFXN1-209ENST00000508290 ZSCAN5DPP0CG00 497 aa19.48■□□□□ 0.71
SFXN1-209ENST00000508290 HOXB3P14651 431 aaPredicted RBP19.48■□□□□ 0.71
SFXN1-209ENST00000508290 ETS1P14921 441 aa19.48■□□□□ 0.71
SFXN1-209ENST00000508290 NDUFS1P28331 727 aa19.48■□□□□ 0.71
SFXN1-209ENST00000508290 TSPAN7P41732 249 aa19.48■□□□□ 0.71
SFXN1-209ENST00000508290 NFE2L1Q14494 772 aa19.48■□□□□ 0.71
SFXN1-209ENST00000508290 RPE65Q16518 533 aa19.48■□□□□ 0.71
SFXN1-209ENST00000508290 CYP1B1Q16678 543 aa19.48■□□□□ 0.71
SFXN1-209ENST00000508290 AARS2Q5JTZ9 985 aaKnown RBP19.48■□□□□ 0.71
SFXN1-209ENST00000508290 PCID2Q5JVF3 399 aa19.48■□□□□ 0.71
SFXN1-209ENST00000508290 ZNF761Q86XN6 746 aaPredicted RBP19.48■□□□□ 0.71
SFXN1-209ENST00000508290 JAMLQ86YT9 394 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms