RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ROPN1LQ96C74 230 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 ZSWIM3Q96MP5 696 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 LBHD1Q9BQE6 289 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-208ENST00000507823 ZDHHC6Q9H6R6 413 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 SLC52A3Q9NQ40 469 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 NFKBIL1Q9UBC1 381 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-208ENST00000507823 ERVW-1Q9UQF0 538 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 GPR45Q9Y5Y3 372 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 IDO1P14902 403 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 SPINT3P49223 89 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 POLR2LP62875 67 aaKnown RBP17.41■□□□□ 0.38
SFXN1-208ENST00000507823 GBX1Q14549 363 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 GEN1Q17RS7 908 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 GDPD4Q6W3E5 623 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 DDIASQ8IXT1 998 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 MIER2Q8N344 545 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 FAM126AQ9BYI3 521 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-208ENST00000507823 SMOXQ9NWM0 555 aa17.41■□□□□ 0.38
SFXN1-208ENST00000507823 SUCOQ9UBS9 1254 aaKnown RBP17.41■□□□□ 0.38
SFXN1-208ENST00000507823 ZNF197O14709 1029 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 SLC9A3R1O14745 358 aaPredicted RBP17.4■□□□□ 0.38
SFXN1-208ENST00000507823 UGT2B4P06133 528 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 LINC00032P0C843 101 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 NTHL1P78549 312 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 B4GALNT1Q00973 533 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 FBXO48Q5FWF7 155 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 CDKL4Q5MAI5 379 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 Q6ZVU0 165 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 OR9I1Q8NGQ6 314 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 DLG3Q92796 817 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 TUBGCP3Q96CW5 907 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 ZNF184Q99676 751 aaPredicted RBP17.4■□□□□ 0.38
SFXN1-208ENST00000507823 BRINP2Q9C0B6 783 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 B4GALT6Q9UBX8 382 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 CD300AQ9UGN4 299 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 LRCH1Q9Y2L9 728 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 ANKRD12Q6UB98 2062 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 MRASO14807 208 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 CHEK2O96017 543 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 ZNF30P17039 623 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 DCDC1P59894 354 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 ERVPABLB-1P60509 514 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 MS4A2Q01362 244 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 ZFP1Q6P2D0 407 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 FRA10AC1Q70Z53 315 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 PAF1Q8N7H5 531 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 ASIC4Q96FT7 647 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 GPATCH1Q9BRR8 931 aaKnown RBP17.4■□□□□ 0.38
SFXN1-208ENST00000507823 BATF3Q9NR55 127 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 AIG1Q9NVV5 245 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 KCTD5Q9NXV2 234 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 TMEM181Q9P2C4 612 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 BTRCQ9Y297 605 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 NDUFAF1Q9Y375 327 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 TIMM22Q9Y584 194 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 HCFC2Q9Y5Z7 792 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 PLXNA2O75051 1894 aa17.4■□□□□ 0.38
SFXN1-208ENST00000507823 LIN7AO14910 233 aaPredicted RBP17.39■□□□□ 0.37
SFXN1-208ENST00000507823 TAPBPO15533 448 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 HGFP14210 728 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 RBBP7Q16576 425 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 TTLL9Q3SXZ7 439 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 ATP13A5Q4VNC0 1218 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 PDE12Q6L8Q7 609 aaKnown RBP17.39■□□□□ 0.37
SFXN1-208ENST00000507823 HCAR2Q8TDS4 363 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 GDPD5Q8WTR4 605 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 ASB9Q96DX5 294 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 COPS8Q99627 209 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 TMPRSS11EQ9UL52 423 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 PSMD13Q9UNM6 376 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 E7ENX8 843 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 OR7A17O14581 309 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 CFLARO15519 480 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 CRCPO75575 148 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 FLOT2Q14254 428 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 MMEL1Q495T6 779 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 TTC23LQ6PF05 361 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 GOLGA7Q7Z5G4 137 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 TMEM126BQ8IUX1 230 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 HEPHQ9BQS7 1158 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 ELOVL2Q9NXB9 296 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 GIMAP2Q9UG22 337 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 ADAMTS6Q9UKP5 1117 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 WNT6Q9Y6F9 365 aa17.39■□□□□ 0.37
SFXN1-208ENST00000507823 TRIM16O95361 564 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 BAG2O95816 211 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 S100BP04271 92 aaPredicted RBP17.38■□□□□ 0.37
SFXN1-208ENST00000507823 CISD3P0C7P0 127 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 CEBPBP17676 345 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 POLR2EP19388 210 aaKnown RBP17.38■□□□□ 0.37
SFXN1-208ENST00000507823 ERFP50548 548 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 TRAP1Q12931 704 aaKnown RBP17.38■□□□□ 0.37
SFXN1-208ENST00000507823 SULT1C3Q6IMI6 304 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 LETMD1Q6P1Q0 360 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 GRASPQ7Z6J2 395 aaPredicted RBP17.38■□□□□ 0.37
SFXN1-208ENST00000507823 HOMEZQ8IX15 550 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 OR52B6Q8NGF0 335 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 MICAL1Q8TDZ2 1067 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 ESAMQ96AP7 390 aa17.38■□□□□ 0.37
SFXN1-208ENST00000507823 PBXIP1Q96AQ6 731 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms