RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 GPR89AB7ZAQ6 455 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 CHUKO15111 745 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 KLHL41O60662 606 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 SLC25A14O95258 325 aaPredicted RBP13.58□□□□□ -0.24
DDR1-260ENST00000507533 CAPN1P07384 714 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 GPR89BP0CG08 455 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 IDSP22304 550 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 FECHP22830 423 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 IL4RP24394 825 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 PSMA2P25787 234 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 OTX2P32243 289 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 PTGER4P35408 488 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 CDH6P55285 790 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
DDR1-260ENST00000507533 MYBPC3Q14896 1274 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 NR1I3Q14994 352 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 DNTTIP2Q5QJE6 756 aaKnown RBP13.58□□□□□ -0.24
DDR1-260ENST00000507533 AGAP9Q5VTM2 703 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 KLHL35Q6PF15 583 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 WASH2PQ6VEQ5 465 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 ADGRG6Q86SQ4 1221 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 LRRTM4Q86VH4 590 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 FJX1Q86VR8 437 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 GALNT16Q8N428 558 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 ATPAF2Q8N5M1 289 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.58□□□□□ -0.24
DDR1-260ENST00000507533 RNF214Q8ND24 703 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 CPT1BQ92523 772 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 CLIP3Q96DZ5 547 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 POM121Q96HA1 1249 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 TIMM29Q9BSF4 260 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 ZNF552Q9H707 407 aaPredicted RBP13.58□□□□□ -0.24
DDR1-260ENST00000507533 NLRC4Q9NPP4 1024 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 LATS2Q9NRM7 1088 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 ETNK2Q9NVF9 386 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 DTLQ9NZJ0 730 aa13.58□□□□□ -0.24
DDR1-260ENST00000507533 A0A1B0GUH1 482 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 TLCD2A6NGC4 264 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 E2F3O00716 465 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 EPHB6O15197 1021 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 PRPSAP2O60256 369 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 IPO13O94829 963 aaKnown RBP13.57□□□□□ -0.24
DDR1-260ENST00000507533 EDN3P14138 238 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 AMPD1P23109 780 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 RORAP35398 523 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 ZNF135P52742 658 aaPredicted RBP13.57□□□□□ -0.24
DDR1-260ENST00000507533 UBASH3AP57075 661 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 JAM2P57087 298 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 ART3Q13508 389 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 IHHQ14623 411 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 ANKRD20A8PQ5CZ79 823 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 ZNF569Q5MCW4 686 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 TMTC4Q5T4D3 741 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 FAM198BQ6UWH4 519 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 TMCO3Q6UWJ1 677 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 CLEC1AQ8NC01 280 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 CCHCR1Q8TD31 782 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 FER1L6-AS2Q96M78 137 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 LYSMD1Q96S90 227 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 CD180Q99467 661 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 SPATA16Q9BXB7 569 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 ZWILCHQ9H900 591 aa13.57□□□□□ -0.24
DDR1-260ENST00000507533 ZBTB20Q9HC78 741 aaPredicted RBP13.57□□□□□ -0.24
DDR1-260ENST00000507533 ZBTB11O95625 1053 aaPredicted RBP13.56□□□□□ -0.24
DDR1-260ENST00000507533 PRLP01236 227 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 SNRPB2P08579 225 aaKnown RBP13.56□□□□□ -0.24
DDR1-260ENST00000507533 MIPP30301 263 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 HALP42357 657 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 CYP4V2Q6ZWL3 525 aaPredicted RBP13.56□□□□□ -0.24
DDR1-260ENST00000507533 MRGPREQ86SM8 312 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 PSTKQ8IV42 348 aaKnown RBP13.56□□□□□ -0.24
DDR1-260ENST00000507533 SYTL1Q8IYJ3 562 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 TEX26Q8N6G2 289 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 LPCAT1Q8NF37 534 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 GRHL3Q8TE85 626 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 IP6K3Q96PC2 410 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 TDRD1Q9BXT4 1180 aaKnown RBP13.56□□□□□ -0.24
DDR1-260ENST00000507533 POLR1EQ9GZS1 481 aaKnown RBP13.56□□□□□ -0.24
DDR1-260ENST00000507533 PCMTD2Q9NV79 361 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 WDR37Q9Y2I8 494 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 KLF2Q9Y5W3 355 aaPredicted RBP13.56□□□□□ -0.24
DDR1-260ENST00000507533 DIDO1Q9BTC0 2240 aaKnown RBP13.56□□□□□ -0.24
DDR1-260ENST00000507533 MTORP42345 2549 aa13.56□□□□□ -0.24
DDR1-260ENST00000507533 PCSK5Q92824 1860 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 DCHS2Q6V1P9 2916 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 H3BRJ5 948 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 DDX3YO15523 660 aaKnown RBP13.55□□□□□ -0.24
DDR1-260ENST00000507533 DIAPH2O60879 1101 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 RNF8O76064 485 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 STSP08842 583 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 RPL26P61254 145 aaKnown RBP13.55□□□□□ -0.24
DDR1-260ENST00000507533 DSC2Q02487 901 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 ABRQ12979 859 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 NCF4Q15080 339 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 PLCL1Q15111 1095 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 TESK1Q15569 626 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 DCAF10Q5QP82 559 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 ALS2CLQ60I27 953 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 SPOCD1Q6ZMY3 1216 aa13.55□□□□□ -0.24
DDR1-260ENST00000507533 ZNF547Q8IVP9 402 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms