RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 KLC4Q9NSK0 619 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 ZDHHC3Q9NYG2 299 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 LRIT1Q9P2V4 623 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 ASIC3Q9UHC3 531 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 ANAPC5Q9UJX4 755 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 TMPRSS11EQ9UL52 423 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 ZNF232Q9UNY5 417 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 KCNK6Q9Y257 313 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 MSRB2Q9Y3D2 182 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 NEU2Q9Y3R4 380 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 TCAF1Q9Y4C2 921 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 PLEKHM1Q9Y4G2 1056 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 NEUROG3Q9Y4Z2 214 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 DOCK9Q9BZ29 2069 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 TMEM131Q92545 1883 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 TRBV23OR9-2A0A075B6M9 112 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 LY6G6EA0A0G2JKS1 128 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 TCRBV7S3A2A0A539 114 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 CCDC78A2IDD5 438 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 CCDC162PA2VCL2 907 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 CCL22O00626 93 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 NDC80O14777 642 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 PFDN6O15212 129 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 GPR39O43194 453 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 NUDT21O43809 227 aaKnown RBP7.15□□□□□ -1.26
GYPB-206ENST00000506516 OPA1O60313 960 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 NOBOXO60393 691 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 POP7O75817 140 aaKnown RBP7.15□□□□□ -1.26
GYPB-206ENST00000506516 PAMP19021 973 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 ACRV1P26436 265 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 MGAT1P26572 445 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 HALP42357 657 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 GPR3P46089 330 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 INSM1Q01101 510 aaPredicted RBP7.15□□□□□ -1.26
GYPB-206ENST00000506516 DR1Q01658 176 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 PTK6Q13882 451 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 DHX34Q14147 1143 aaKnown RBP7.15□□□□□ -1.26
GYPB-206ENST00000506516 KCNJ11Q14654 390 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 KHDC1Q4VXA5 237 aaKnown RBP7.15□□□□□ -1.26
GYPB-206ENST00000506516 FASTKD1Q53R41 847 aaKnown RBP7.15□□□□□ -1.26
GYPB-206ENST00000506516 AARS2Q5JTZ9 985 aaKnown RBP7.15□□□□□ -1.26
GYPB-206ENST00000506516 FNBP1LQ5T0N5 605 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 CASC4Q6P4E1 433 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 ZNF449Q6P9G9 518 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 IYDQ6PHW0 289 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 AFTPHQ6ULP2 937 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 CRTC3Q6UUV7 619 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 DET1Q7L5Y6 550 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 MAATS1Q7Z4T9 603 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 SLC9B2Q86UD5 537 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 SERPINA9Q86WD7 417 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 NAGSQ8N159 534 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 CACTIN-AS1Q8N1I8 211 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 NXPE1Q8N323 547 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 RASGEF1AQ8N9B8 481 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 AVL9Q8NBF6 648 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 KYQ8NBH2 561 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 OR4L1Q8NH43 312 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 CPT1BQ92523 772 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 SH3KBP1Q96B97 665 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 ZNF775Q96BV0 537 aaPredicted RBP7.15□□□□□ -1.26
GYPB-206ENST00000506516 GRAMD1AQ96CP6 724 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 SGF29Q96ES7 293 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 SGSM3Q96HU1 749 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 SLC38A3Q99624 504 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 CCDC3Q9BQI4 270 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 KIFC1Q9BW19 673 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 VPS37BQ9H9H4 285 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 MRM3Q9HC36 420 aaKnown RBP7.15□□□□□ -1.26
GYPB-206ENST00000506516 SAMD15Q9P1V8 674 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 TBC1D29Q9UFV1 150 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 CLCA2Q9UQC9 943 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 DNAJC16Q9Y2G8 782 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 PCYT1BQ9Y5K3 369 aaPredicted RBP7.15□□□□□ -1.26
GYPB-206ENST00000506516 ST14Q9Y5Y6 855 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 U3KQA8 63 aa7.15□□□□□ -1.26
GYPB-206ENST00000506516 COL5A1P20908 1838 aaPredicted RBP7.15□□□□□ -1.27
GYPB-206ENST00000506516 BPTFQ12830 3046 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 TRBV5-4A0A0C4DH59 114 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 KIR2DS5A0A0G2JLQ3 304 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 A0A0G2JNG1 304 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 C17orf113A0A1B0GUU1 675 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 MGAT4DA6NG13 374 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 OR2AG2A6NM03 316 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 PDZK1P1A8MUH7 402 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 TMX2-CTNND1H3BSU7 103 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 GOLGA8MH3BSY2 632 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 KIR2DS3K7RE56 304 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 KIF2AO00139 706 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 QSOX1O00391 747 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 DNALI1O14645 258 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 AVILO75366 819 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 TCEA3O75764 348 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 URI1O94763 535 aaPredicted RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 AP2A2O94973 939 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 TOP3BO95985 862 aaKnown RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 MT-CO3P00414 261 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 GOT2P00505 430 aaKnown RBP7.14□□□□□ -1.27
GYPB-206ENST00000506516 GSTM1P09488 218 aa7.14□□□□□ -1.27
GYPB-206ENST00000506516 F3P13726 295 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms