RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SMYD4Q8IYR2 804 aaPredicted RBP3.23□□□□□ -1.89
TCOF1-208ENST00000506063 GHDCQ8N2G8 530 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 LRRC17Q8N6Y2 441 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 MDS2Q8NDY4 140 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 FBXO18Q8NFZ0 1043 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 BRIX1Q8TDN6 353 aaKnown RBP3.23□□□□□ -1.89
TCOF1-208ENST00000506063 SEMA4DQ92854 862 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 NUS1Q96E22 293 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 DTD2Q96FN9 168 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 ZDHHC12Q96GR4 267 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 HSFY1Q96LI6 401 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 GDAP1L1Q96MZ0 367 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 SPSB2Q99619 263 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 SPON2Q9BUD6 331 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 SARGQ9BW04 601 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 TLR10Q9BXR5 811 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 MIS12Q9H081 205 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 KLC2Q9H0B6 622 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 SUV39H2Q9H5I1 410 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 STN1Q9H668 368 aaKnown RBP3.23□□□□□ -1.89
TCOF1-208ENST00000506063 TENM2Q9NT68 2774 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 DMAC2Q9NW81 257 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 GPATCH2LQ9NWQ4 482 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 TMEM160Q9NX00 188 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 PTGFRNQ9P2B2 879 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 CNOT6Q9ULM6 557 aaKnown RBP3.23□□□□□ -1.89
TCOF1-208ENST00000506063 NEU3Q9UQ49 428 aa3.23□□□□□ -1.89
TCOF1-208ENST00000506063 MRPS2Q9Y399 296 aaKnown RBP3.23□□□□□ -1.89
TCOF1-208ENST00000506063 A0A096LNT2 108 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 A0A0G2JNJ9 132 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 A0A1W2PQ72 361 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 OR5H15A6NDH6 313 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SLC9B1P1A6NJY1 282 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 OR5K4A6NMS3 321 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 A8MX80 341 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 TMEM150CB9EJG8 249 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 FAM227AF5H4B4 570 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SYT5O00445 386 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 TRAFD1O14545 582 aaPredicted RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 TMPRSS2O15393 492 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SIAH2O43255 324 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ZNF749O43361 778 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SNX2O60749 519 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 DNAJB6O75190 326 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 MATN4O95460 622 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ZBTB11O95625 1053 aaPredicted RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ONECUT2O95948 504 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 CALCAP01258 141 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 STATHP02808 62 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 CTSBP07858 339 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 CELA2AP08217 269 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 PRR35P0CG20 571 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SLC2A3P11169 496 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 EPXP11678 715 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ACP5P13686 325 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 TRIM21P19474 475 aaKnown RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 TFE3P19532 575 aaPredicted RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 TACR1P25103 407 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ETV3P41162 512 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 UBA7P41226 1012 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 RGRP47804 291 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 GABRA4P48169 554 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 PTH2RP49190 550 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 KPNA2P52292 529 aaKnown RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 MARSP56192 900 aaKnown RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SLC8A3P57103 927 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 HMGN5P82970 282 aaKnown RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ALDH6A1Q02252 535 aaKnown RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 DPTQ07507 201 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 PPP3CAQ08209 521 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SLC9A5Q14940 896 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 POLD3Q15054 466 aaPredicted RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 PTPRRQ15256 657 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 RABEP1Q15276 862 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 POU4F3Q15319 338 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 HYAL4Q2M3T9 481 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 TUBB8Q3ZCM7 444 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 FBXL19-AS1Q494R0 122 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 FBLN7Q53RD9 439 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ZNF766Q5HY98 468 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ARL6IP4Q66PJ3 421 aaKnown RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SMYD5Q6GMV2 418 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 RTL6Q6ICC9 239 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 TMEM211Q6ICI0 200 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 RHBDD2Q6NTF9 364 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 HIBCHQ6NVY1 386 aaPredicted RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ERAP2Q6P179 960 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 BRAT1Q6PJG6 821 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 ADAMTSL4Q6UY14 1074 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 COX15Q7KZN9 410 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 CHST15Q7LFX5 561 aaPredicted RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 NLRP14Q86W24 1093 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 CAMK1DQ8IU85 385 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 GALNT13Q8IUC8 556 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 MCATQ8IVS2 390 aaKnown RBP3.22□□□□□ -1.89
TCOF1-208ENST00000506063 EID3Q8N140 333 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 AOPEPQ8N6M6 819 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 SIRT6Q8N6T7 355 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 FAM184AQ8NB25 1140 aa3.22□□□□□ -1.89
TCOF1-208ENST00000506063 AVL9Q8NBF6 648 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms