RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 GEMP55040 296 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 COPS2P61201 443 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 NFKB2Q00653 900 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 CDC20Q12834 499 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 LONRF2Q1L5Z9 754 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 ITPRIPL1Q6GPH6 555 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 IRGCQ6NXR0 463 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 TMEM220Q6QAJ8 160 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 C6orf15Q6UXA7 325 aaPredicted RBP11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 BBS12Q6ZW61 710 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 DAAM2Q86T65 1068 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 RASGRP3Q8IV61 690 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 BEND7Q8N7W2 519 aaPredicted RBP11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 RASGEF1AQ8N9B8 481 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 TC2NQ8N9U0 490 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 DDHD1Q8NEL9 900 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 ZNF398Q8TD17 642 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 KLHL6Q8WZ60 621 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 STARD8Q92502 1023 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 RSC1A1Q92681 617 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 ZNF514Q96K75 400 aaPredicted RBP11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 CALR3Q96L12 384 aaKnown RBP11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 TRIM5Q9C035 493 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 GOLPH3Q9H4A6 298 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 UGT1A7Q9HAW7 530 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 UGT1A10Q9HAW8 530 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 UGT1A8Q9HAW9 530 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 SMOXQ9NWM0 555 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 WDR37Q9Y2I8 494 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 PCDHB3Q9Y5E6 796 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 RPS6KL1Q9Y6S9 549 aa11.83□□□□□ -0.52
PDLIM7-214ENST00000505746 HELZ2Q9BYK8 2649 aaKnown RBP11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 KLHL33A6NCF5 533 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 OR2AG2A6NM03 316 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 H7C0C1 242 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 BUD23O43709 281 aaKnown RBP11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 KIF1CO43896 1103 aaKnown RBP11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 NDUFA10O95299 355 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 MT-ND3P03897 115 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 CCNYL3P0C7X3 344 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 FGF5P12034 268 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 MSH3P20585 1137 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 FECHP22830 423 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 RBL1P28749 1068 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 ATP5OP48047 213 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 CTSCP53634 463 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 SH3BP2P78314 561 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 SEPT6Q14141 434 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 PRPSAP1Q14558 356 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 RPE65Q16518 533 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 GPRC6AQ5T6X5 926 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 SARM1Q6SZW1 724 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 FAM92BQ6ZTR7 304 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 PPP1R3BQ86XI6 285 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 APOBEC4Q8WW27 367 aaKnown RBP11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 UBXN4Q92575 508 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 STAMBPL1Q96FJ0 436 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 HEMGNQ9BXL5 484 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 TRIM4Q9C037 500 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 GBA3Q9H227 469 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 PDE7BQ9NP56 450 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 EFR3BQ9Y2G0 817 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 AAR2Q9Y312 384 aaKnown RBP11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 AHCTF1Q8WYP5 2266 aa11.82□□□□□ -0.52
PDLIM7-214ENST00000505746 C5orf60A6NFR6 353 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 SPAG6O75602 509 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 STK10O94804 968 aaKnown RBP11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 KIAA0754O94854 1291 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 PRAMEF1O95521 474 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 AGTP01019 485 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 PYGMP11217 842 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 ZNF28P17035 718 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 NELFEP18615 380 aaKnown RBP11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 LPOP22079 712 aaPredicted RBP11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 CTNNA2P26232 953 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 AKT1P31749 480 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 DLSTP36957 453 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 CETN2P41208 172 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 MARCKSL1P49006 195 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 PDE1BQ01064 536 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 NFE2L1Q14494 772 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 PLCL1Q15111 1095 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 TAF1AQ15573 450 aaPredicted RBP11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 DEFB109BQ30KR1 87 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 FNBP1LQ5T0N5 605 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 METRNLQ641Q3 311 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 C16orf46Q6P387 395 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 BPHLQ86WA6 291 aaPredicted RBP11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 CDKL3Q8IVW4 592 aaPredicted RBP11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 SIDT2Q8NBJ9 832 aaKnown RBP11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 GALNT6Q8NCL4 622 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 C9orf43Q8TAL5 461 aaPredicted RBP11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 ZFPM2Q8WW38 1151 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 KRT35Q92764 455 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 LRRC45Q96CN5 670 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 ELMO2Q96JJ3 720 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 PPP1R2P1Q96PQ5 205 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 FICDQ9BVA6 458 aa11.81□□□□□ -0.52
PDLIM7-214ENST00000505746 SEMA5BQ9P283 1151 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms