RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, human

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM5-208	ENST00000504489	KLHL33	A6NCF5	533 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	PRR19	A6NJB7	356 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	OR2AG2	A6NM03	316 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	GOLGA8K	D6RF30	607 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	GOLGA8T	H3BQL2	631 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	TRIM38	O00635	465 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	PFDN6	O15212	129 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	FFAR2	O15552	330 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	POP7	O75817	140 aa	Known RBP	11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	OGN	P20774	298 aa	Known RBP	11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	AK4	P27144	223 aa	Predicted RBP	11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	PML	P29590	882 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	PRLHR	P49683	370 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	DMPK	Q09013	629 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	THOC5	Q13769	683 aa	Known RBP	11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	INSC	Q1MX18	579 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	DEFB133	Q30KQ1	61 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	RNF187	Q5TA31	235 aa	Predicted RBP	11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	UNC5A	Q6ZN44	842 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	CEP128	Q6ZU80	1094 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	LDB1	Q86U70	411 aa	Predicted RBP	11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	CILP2	Q8IUL8	1156 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	ANKMY2	Q8IV38	441 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	ZBED8	Q8IZ13	594 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	CLDN19	Q8N6F1	224 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	FAM46D	Q8NEK8	389 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	PYROXD1	Q8WU10	500 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	IFT81	Q8WYA0	676 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	CCDC97	Q96F63	343 aa	Predicted RBP	11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	CFAP36	Q96G28	342 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	CDC6	Q99741	560 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	BOC	Q9BWV1	1114 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	TSPYL1	Q9H0U9	437 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	DLL3	Q9NYJ7	618 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	TAAR2	Q9P1P5	351 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	MTRF1L	Q9UGC7	380 aa	Known RBP	11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	SLC23A2	Q9UGH3	650 aa		11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	TSR3	Q9UJK0	312 aa	Known RBP	11.72	□□□□□ -0.53
PDLIM5-208	ENST00000504489	C17orf113	A0A1B0GUU1	675 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	MGAT4D	A6NG13	374 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489		F8W8V4	182 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	PRMT5	O14744	637 aa	Predicted RBP	11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	SIGLEC6	O43699	453 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	NDUFS3	O75489	264 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	SLU7	O95391	586 aa	Known RBP	11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	GSTA2	P09210	222 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	GSTM1	P09488	218 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	RHOXF2B	P0C7M4	288 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	ACP5	P13686	325 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	VCL	P18206	1134 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	ACTR1B	P42025	376 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	MAGEA4	P43358	317 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	CARS	P49589	748 aa	Known RBP	11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	ADAR	P55265	1226 aa	Known RBP	11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	ACTR1A	P61163	376 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	GSTM4	Q03013	218 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	TCEA2	Q15560	299 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	OGFOD3	Q6PK18	319 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	SLC30A9	Q6PML9	568 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	DET1	Q7L5Y6	550 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	GLRX5	Q86SX6	157 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	AMZ2	Q86W34	360 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	KCNMB4	Q86W47	210 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	LRRC6	Q86X45	466 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	RELL1	Q8IUW5	271 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	OTUD6B	Q8N6M0	293 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	PNPLA1	Q8N8W4	532 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	GSDMB	Q8TAX9	411 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	CERS2	Q96G23	380 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	CAMK1G	Q96NX5	476 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	FMO2	Q99518	471 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	RHOXF2	Q9BQY4	288 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	FAM167B	Q9BTA0	163 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	SLC32A1	Q9H598	525 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	VPS37B	Q9H9H4	285 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	KLC4	Q9NSK0	619 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	INTS10	Q9NVR2	710 aa	Known RBP	11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	MOCS1	Q9NZB8	636 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	IL1RAPL1	Q9NZN1	696 aa		11.71	□□□□□ -0.53
PDLIM5-208	ENST00000504489	SNRNP200	O75643	2136 aa	Known RBP	11.71	□□□□□ -0.54
PDLIM5-208	ENST00000504489	KIF26B	Q2KJY2	2108 aa		11.71	□□□□□ -0.54
PDLIM5-208	ENST00000504489	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	OR1I1	O60431	355 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	LDOC1	O95751	146 aa	Predicted RBP	11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	S1PR4	O95977	384 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	OR56A5	P0C7T3	313 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ERVK-10	P10266	1014 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	CEACAM1	P13688	526 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	RPS3	P23396	243 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ECHS1	P30084	290 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	HSP90AA5P	Q58FG0	334 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	TEX35	Q5T0J7	233 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ZNF470	Q6ECI4	717 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	ZNF449	Q6P9G9	518 aa		11.7	□□□□□ -0.54
PDLIM5-208	ENST00000504489	TRMT10B	Q6PF06	316 aa	Known RBP	11.7	□□□□□ -0.54

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