RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 CCDC25Q86WR0 208 aa16.22■□□□□ 0.19
SCLT1-205ENST00000503401 NAGSQ8N159 534 aa16.22■□□□□ 0.19
SCLT1-205ENST00000503401 LILRA3Q8N6C8 439 aaPredicted RBP16.22■□□□□ 0.19
SCLT1-205ENST00000503401 ARL10Q8N8L6 244 aa16.22■□□□□ 0.19
SCLT1-205ENST00000503401 HEXDCQ8WVB3 486 aa16.22■□□□□ 0.19
SCLT1-205ENST00000503401 SEC14L1Q92503 715 aa16.22■□□□□ 0.19
SCLT1-205ENST00000503401 ZNF514Q96K75 400 aaPredicted RBP16.22■□□□□ 0.19
SCLT1-205ENST00000503401 TTC1Q99614 292 aa16.22■□□□□ 0.19
SCLT1-205ENST00000503401 SAYSD1Q9NPB0 183 aa16.22■□□□□ 0.19
SCLT1-205ENST00000503401 FAM169AQ9Y6X4 670 aa16.22■□□□□ 0.19
SCLT1-205ENST00000503401 RHOXF2BP0C7M4 288 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 ERVK-10P10266 1014 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 CKMT1AP12532 417 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 TTPAP49638 278 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 THOC5Q13769 683 aaKnown RBP16.21■□□□□ 0.19
SCLT1-205ENST00000503401 GLE1Q53GS7 698 aaKnown RBP16.21■□□□□ 0.19
SCLT1-205ENST00000503401 HSP90AA5PQ58FG0 334 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 MRNIPQ6NTE8 343 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 CAPN12Q6ZSI9 719 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 CENPUQ71F23 418 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 DGLUCYQ7Z3D6 616 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 GLRX5Q86SX6 157 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 DENND6AQ8IWF6 608 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 GPR156Q8NFN8 814 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 LRRC39Q96DD0 335 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 RHOXF2Q9BQY4 288 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 NAT9Q9BTE0 207 aa16.21■□□□□ 0.19
SCLT1-205ENST00000503401 UBA6A0AVT1 1052 aaPredicted RBP16.2■□□□□ 0.18
SCLT1-205ENST00000503401 PRR19A6NJB7 356 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 IQCF5A8MTL0 148 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 PDZK1P1A8MUH7 402 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 BHMG1C9JSJ3 638 aaPredicted RBP16.2■□□□□ 0.18
SCLT1-205ENST00000503401 CASC3O15234 703 aaKnown RBP16.2■□□□□ 0.18
SCLT1-205ENST00000503401 NDUFS3O75489 264 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 TTC4O95801 387 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 FTH1P19P0C7X4 201 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 ITGB6P18564 788 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 ACADVLP49748 655 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 CAV1Q03135 178 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 CTBP1Q13363 440 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 ZNF789Q5FWF6 425 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 SPANXN3Q5MJ09 141 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 TRMT10BQ6PF06 316 aaKnown RBP16.2■□□□□ 0.18
SCLT1-205ENST00000503401 OGFOD3Q6PK18 319 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 XKR5Q6UX68 686 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 NAPRTQ6XQN6 538 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 SDCCAG8Q86SQ7 713 aaPredicted RBP16.2■□□□□ 0.18
SCLT1-205ENST00000503401 KCNMB4Q86W47 210 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 CILP2Q8IUL8 1156 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 GPR150Q8NGU9 434 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 IFT81Q8WYA0 676 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 GLMNQ92990 594 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 IARS2Q9NSE4 1012 aaKnown RBP16.2■□□□□ 0.18
SCLT1-205ENST00000503401 ZDHHC18Q9NUE0 388 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 SCHIP1Q9P0W5 487 aaPredicted RBP16.2■□□□□ 0.18
SCLT1-205ENST00000503401 SLC17A6Q9P2U8 582 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 PADI4Q9UM07 663 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 PSMD13Q9UNM6 376 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 WDR37Q9Y2I8 494 aa16.2■□□□□ 0.18
SCLT1-205ENST00000503401 A6NCN8 305 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 MGAT4DA6NG13 374 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 VCLP18206 1134 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 PPARGP37231 505 aaPredicted RBP16.19■□□□□ 0.18
SCLT1-205ENST00000503401 SLC1A2P43004 574 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 EIF3BP55884 814 aaKnown RBP16.19■□□□□ 0.18
SCLT1-205ENST00000503401 HLTFQ14527 1009 aaKnown RBP eCLIP16.19■□□□□ 0.183e-6■■□□□ 14.5
SCLT1-205ENST00000503401 TYSND1Q2T9J0 566 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 C14orf28Q4W4Y0 310 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 PERM1Q5SV97 790 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 EFL1Q7Z2Z2 1120 aaKnown RBP16.19■□□□□ 0.18
SCLT1-205ENST00000503401 CFAP206Q8IYR0 622 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 OR2L2Q8NH16 312 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 IFI44Q8TCB0 444 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 LKAAEAR1Q8TD35 194 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 LINC00615Q96LM1 132 aaPredicted RBP16.19■□□□□ 0.18
SCLT1-205ENST00000503401 CCM2Q9BSQ5 444 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 PPANQ9NQ55 473 aaKnown RBP16.19■□□□□ 0.18
SCLT1-205ENST00000503401 FBXO6Q9NRD1 293 aaPredicted RBP16.19■□□□□ 0.18
SCLT1-205ENST00000503401 FAM114A2Q9NRY5 505 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 CRYL1Q9Y2S2 319 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 DNMT3AQ9Y6K1 912 aaPredicted RBP16.19■□□□□ 0.18
SCLT1-205ENST00000503401 UNC13CQ8NB66 2214 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 WDFY3Q8IZQ1 3526 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 EME2A4GXA9 379 aaPredicted RBP16.19■□□□□ 0.18
SCLT1-205ENST00000503401 PRMT5O14744 637 aaPredicted RBP16.19■□□□□ 0.18
SCLT1-205ENST00000503401 AP2A2O94973 939 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 F3P13726 295 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 BRAFP15056 766 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 OGNP20774 298 aaKnown RBP16.19■□□□□ 0.18
SCLT1-205ENST00000503401 IDSP22304 550 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 ACP1P24666 158 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 RPIAP49247 311 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 CLCNKAP51800 687 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 MPP1Q00013 466 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 DMPKQ09013 629 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 STEAP4Q687X5 459 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 CCNJLQ8IV13 435 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 KRT222Q8N1A0 295 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 ARL14Q8N4G2 192 aa16.19■□□□□ 0.18
SCLT1-205ENST00000503401 SLC37A2Q8TED4 501 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms