RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 TMPRSS11EQ9UL52 423 aa5.98□□□□□ -1.45
LSM3P4-201ENST00000502948 INTUQ9ULD6 942 aa5.98□□□□□ -1.45
LSM3P4-201ENST00000502948 TP53TG5Q9Y2B4 290 aa5.98□□□□□ -1.45
LSM3P4-201ENST00000502948 TTLL3Q9Y4R7 772 aa5.98□□□□□ -1.45
LSM3P4-201ENST00000502948 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.98□□□□□ -1.45
LSM3P4-201ENST00000502948 SHANK1Q9Y566 2161 aa5.98□□□□□ -1.45
LSM3P4-201ENST00000502948 NUP210LQ5VU65 1888 aa5.98□□□□□ -1.45
LSM3P4-201ENST00000502948 IGHV5-51A0A0C4DH38 117 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 WIPF3A6NGB9 483 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 OR52A4PA6NMU1 304 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 AGRPO00253 132 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 VPS4BO75351 444 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 RASSF9O75901 435 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 DDAH2O95865 285 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 TPM3P06753 285 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 CD63P08962 238 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 GSTM1P09488 218 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 FURINP09958 794 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 PRKAR1AP10644 381 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 PTPN3P26045 913 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 NDUFS1P28331 727 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 SPAM1P38567 509 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 ANP32AP39687 249 aaKnown RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 HADHAP40939 763 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 SSR1P43307 286 aaKnown RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 MAPK9P45984 424 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 LEPRP48357 1165 aaKnown RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 CD151P48509 253 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 PPM1FP49593 454 aaPredicted RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 SH3BP2P78314 561 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 PDE1BQ01064 536 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 GSTM4Q03013 218 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 AP1B1Q10567 949 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 XRCC4Q13426 336 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 TUBB3Q13509 450 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 ERV3-1Q14264 604 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 NFKBIBQ15653 356 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 IGFBP7Q16270 282 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 RPE65Q16518 533 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 LONRF2Q1L5Z9 754 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 BCL7AQ4VC05 210 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 KHDC1Q4VXA5 237 aaKnown RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 TMTC4Q5T4D3 741 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 CAPRIN2Q6IMN6 1127 aaKnown RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 PWWP2BQ6NUJ5 590 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 KDELC1Q6UW63 502 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 TRAPPC5Q8IUR0 188 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 RHOT1Q8IXI2 618 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 TTC30BQ8N4P2 665 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 TMEM102Q8N9M5 508 aaPredicted RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 GLIS1Q8NBF1 620 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 SIDT2Q8NBJ9 832 aaKnown RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 OR2L2Q8NH16 312 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 SLC35G2Q8TBE7 412 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 HEXDCQ8WVB3 486 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 ZNF501Q96CX3 271 aaPredicted RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 TTC25Q96NG3 672 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 IP6K3Q96PC2 410 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 CCM2Q9BSQ5 444 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 DHRS4Q9BTZ2 278 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 NLNQ9BYT8 704 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 TWSG1Q9GZX9 223 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 ACTL8Q9H568 366 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 KIR3DX1Q9H7L2 352 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 C1GALT1Q9NS00 363 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 FGF21Q9NSA1 209 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 KCND1Q9NSA2 647 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 C5AR2Q9P296 337 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 KLHL3Q9UH77 587 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 FAM153AQ9UHL3 310 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 TRHDEQ9UKU6 1024 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 VPS4AQ9UN37 437 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 SHOC2Q9UQ13 582 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 WDR37Q9Y2I8 494 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 MAP4K5Q9Y4K4 846 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 HEBP2Q9Y5Z4 205 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 MRPS18BQ9Y676 258 aaKnown RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 COLEC10Q9Y6Z7 277 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 LRRK2Q5S007 2527 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 MED13Q9UHV7 2174 aa5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 USP9YO00507 2555 aaPredicted RBP5.97□□□□□ -1.45
LSM3P4-201ENST00000502948 PIKFYVEQ9Y2I7 2098 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 GLYATL1P3A0A0U1RQE8 302 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 PIPSLA2A3N6 862 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 LRRD1A4D1F6 860 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 CDC14CA4D256 554 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 MGAT4DA6NG13 374 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 HACD1B0YJ81 288 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 GAPDHSO14556 408 aaPredicted RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 AURKAO14965 403 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 PSTPIP1O43586 416 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 KIF1CO43896 1103 aaKnown RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 DPM1O60762 260 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 POP7O75817 140 aaKnown RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 TIAF1O95411 115 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 MT-CYBP00156 380 aaPredicted RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 IGHEP01854 428 aa5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 KLK3P07288 261 aaPredicted RBP5.96□□□□□ -1.46
LSM3P4-201ENST00000502948 HBQ1P09105 142 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms