RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	AKT1	P31749	480 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	NUDT1	P36639	197 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	SKIV2L2	P42285	1042 aa	Known RBP	11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	GCGR	P47871	477 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	CCT5	P48643	541 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	KIAA1024L	P59773	190 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	PFN3	P60673	137 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	DMWD	Q09019	674 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	KYAT3	Q6YP21	454 aa	Known RBP	11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	GCNT7	Q6ZNI0	430 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	RAPH1	Q70E73	1250 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	FAM160A2	Q8N612	972 aa	Predicted RBP	11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	SIDT2	Q8NBJ9	832 aa	Known RBP	11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	GDAP1	Q8TB36	358 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	NXNL1	Q96CM4	212 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	SGF29	Q96ES7	293 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	DCUN1D1	Q96GG9	259 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	PDLIM5	Q96HC4	596 aa	Known RBP	11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	BMF	Q96LC9	184 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	LINC00615	Q96LM1	132 aa	Predicted RBP	11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	PANX3	Q96QZ0	392 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	APOO	Q9BUR5	198 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	GPR174	Q9BXC1	333 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	WDR26	Q9H7D7	661 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	KCNK9	Q9NPC2	374 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	SPATS2L	Q9NUQ6	558 aa	Known RBP	11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	TMEM216	Q9P0N5	145 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	GULP1	Q9UBP9	304 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	TRMT6	Q9UJA5	497 aa	Known RBP	11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	GRID1	Q9ULK0	1009 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	DMTF1	Q9Y222	760 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	HS3ST3A1	Q9Y663	406 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	PIKFYVE	Q9Y2I7	2098 aa		11.97	□□□□□ -0.49
MATR3-231	ENST00000502394	POM121B	A6NF01	834 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	TARM1	B6A8C7	271 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	DNAJC6	O75061	913 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	GPC4	O75487	556 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	CDK14	O94921	469 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	LTA4H	P09960	611 aa	Known RBP	11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	MYCLP1	P12525	358 aa	Predicted RBP	11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	CD46	P15529	392 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	CD1D	P15813	335 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	ZNF8	P17098	575 aa	Predicted RBP	11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	CHRM3	P20309	590 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	AOAH	P28039	575 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	CCR7	P32248	378 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	ATP1A2	P50993	1020 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	GYS2	P54840	703 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	TSNAXIP1	Q2TAA8	658 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	UGT3A1	Q6NUS8	523 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	C16orf46	Q6P387	395 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	TMEM220	Q6QAJ8	160 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	DET1	Q7L5Y6	550 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	ABI3BP	Q7Z7G0	1075 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	C11orf96	Q7Z7L8	435 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	RASGRP3	Q8IV61	690 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	ZNF547	Q8IVP9	402 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	NKAP	Q8N5F7	415 aa	Known RBP	11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	CADM4	Q8NFZ8	388 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	INPP5D	Q92835	1189 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	FOXJ1	Q92949	421 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	FAM136A	Q96C01	138 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	BIRC7	Q96CA5	298 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	SCARF2	Q96GP6	870 aa	Predicted RBP	11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	FAM111A	Q96PZ2	611 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	DERL2	Q9GZP9	239 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	OR2AG1	Q9H205	316 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	SYTL2	Q9HCH5	934 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	GPR27	Q9NS67	375 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	GPR34	Q9UPC5	381 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	CDYL	Q9Y232	598 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	SLC17A4	Q9Y2C5	497 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	OR1A2	Q9Y585	309 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	CACNA1I	Q9P0X4	2223 aa		11.96	□□□□□ -0.49
MATR3-231	ENST00000502394	EML5	Q05BV3	1969 aa		11.96	□□□□□ -0.5
MATR3-231	ENST00000502394	TTC28	Q96AY4	2481 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394		A0A1W2PPC4	97 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	METTL12	A8MUP2	240 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	GPR89A	B7ZAQ6	455 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394		E5RI56	91 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	EIF3F	O00303	357 aa	Predicted RBP	11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	TOR1B	O14657	336 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	POLR3G	O15318	223 aa	Predicted RBP	11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	NUAK1	O60285	661 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	MAGEC1	O60732	1142 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	TRIM16	O95361	564 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	FTH1	P02794	183 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	FUCA1	P04066	466 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	GSTM1	P09488	218 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	GPR89B	P0CG08	455 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	CCDC166	P0CW27	439 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	ITGB6	P18564	788 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	AKT2	P31751	481 aa		11.95	□□□□□ -0.5
MATR3-231	ENST00000502394	CLDN2	P57739	230 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms