RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 DSELQ8IZU8 1212 aa12.38□□□□□ -0.43
LMNA-218ENST00000502357 SIDT2Q8NBJ9 832 aaKnown RBP12.38□□□□□ -0.43
LMNA-218ENST00000502357 PCMTD1Q96MG8 357 aaPredicted RBP12.38□□□□□ -0.43
LMNA-218ENST00000502357 PPM1MQ96MI6 270 aa12.38□□□□□ -0.43
LMNA-218ENST00000502357 VPS35Q96QK1 796 aa12.38□□□□□ -0.43
LMNA-218ENST00000502357 ZFYVE1Q9HBF4 777 aa12.38□□□□□ -0.43
LMNA-218ENST00000502357 LATS2Q9NRM7 1088 aa12.38□□□□□ -0.43
LMNA-218ENST00000502357 ASF1BQ9NVP2 202 aa12.38□□□□□ -0.43
LMNA-218ENST00000502357 MYO1AQ9UBC5 1043 aa12.38□□□□□ -0.43
LMNA-218ENST00000502357 SCINQ9Y6U3 715 aa12.38□□□□□ -0.43
LMNA-218ENST00000502357 AKAP9Q99996 3911 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 AURKAO14965 403 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 VEGFDO43915 354 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 CPNE3O75131 537 aaKnown RBP12.37□□□□□ -0.43
LMNA-218ENST00000502357 MTA2O94776 668 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 CDK14O94921 469 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 CCDC172P0C7W6 258 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 IDSP22304 550 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 RPS15P62841 145 aaKnown RBP12.37□□□□□ -0.43
LMNA-218ENST00000502357 TUBB4BP68371 445 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 TUBB2AQ13885 445 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 GALNT3Q14435 633 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 NR6A1Q15406 480 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 RPE65Q16518 533 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 ZNF385CQ66K41 422 aaPredicted RBP12.37□□□□□ -0.43
LMNA-218ENST00000502357 TIGD7Q6NT04 549 aaPredicted RBP12.37□□□□□ -0.43
LMNA-218ENST00000502357 HPS6Q86YV9 775 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 ENDOVQ8N8Q3 282 aaKnown RBP12.37□□□□□ -0.43
LMNA-218ENST00000502357 CCHCR1Q8TD31 782 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 HDAC11Q96DB2 347 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 TUBB2BQ9BVA1 445 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 MAGEE1Q9HCI5 957 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 KCND1Q9NSA2 647 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 TRIM10Q9UDY6 481 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 TCFL5Q9UL49 500 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 SHOC2Q9UQ13 582 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 BTRCQ9Y297 605 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 NTNG1Q9Y2I2 539 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 SPO11Q9Y5K1 396 aa12.37□□□□□ -0.43
LMNA-218ENST00000502357 DIDO1Q9BTC0 2240 aaKnown RBP12.37□□□□□ -0.43
LMNA-218ENST00000502357 CSMD2Q7Z408 3487 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 OR5K3A6NET4 321 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 TLCD2A6NGC4 264 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 MEN1O00255 615 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 GAPDHSO14556 408 aaPredicted RBP12.36□□□□□ -0.43
LMNA-218ENST00000502357 ZNF185O15231 689 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 SCRG1O75711 98 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 LCA5LO95447 670 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 MYBL1P10243 752 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 KPNA2P52292 529 aaKnown RBP12.36□□□□□ -0.43
LMNA-218ENST00000502357 CTSCP53634 463 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 IFI35P80217 286 aaPredicted RBP12.36□□□□□ -0.43
LMNA-218ENST00000502357 HSD11B2P80365 405 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 TMEM115Q12893 351 aaPredicted RBP12.36□□□□□ -0.43
LMNA-218ENST00000502357 ATP13A5Q4VNC0 1218 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 HGSNATQ68CP4 663 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 CYB5D1Q6P9G0 228 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 FBXO38Q6PIJ6 1188 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 RHOT1Q8IXI2 618 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 CXorf40BQ96DE9 158 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 IMP4Q96G21 291 aaKnown RBP12.36□□□□□ -0.43
LMNA-218ENST00000502357 CD180Q99467 661 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 NLNQ9BYT8 704 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 THAP2Q9H0W7 228 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 MRPL47Q9HD33 250 aaKnown RBP12.36□□□□□ -0.43
LMNA-218ENST00000502357 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
LMNA-218ENST00000502357 PCMTD2Q9NV79 361 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 SLC5A6Q9Y289 635 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 ZNF711Q9Y462 761 aa12.36□□□□□ -0.43
LMNA-218ENST00000502357 ANKRD12Q6UB98 2062 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 KCNK1O00180 336 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 KLF7O75840 302 aaPredicted RBP12.35□□□□□ -0.43
LMNA-218ENST00000502357 TPM2P07951 284 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 SKILP12757 684 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 CA4P22748 312 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 VARSP26640 1264 aaKnown RBP12.35□□□□□ -0.43
LMNA-218ENST00000502357 HNRNPH3P31942 346 aaKnown RBP12.35□□□□□ -0.43
LMNA-218ENST00000502357 VAV2P52735 878 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 PPIDQ08752 370 aaKnown RBP12.35□□□□□ -0.43
LMNA-218ENST00000502357 ATP1A4Q13733 1029 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 ZRANB3Q5FWF4 1079 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 IGFL3Q6UXB1 125 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 SPOCD1Q6ZMY3 1216 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 MED25Q71SY5 747 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 TMEM151BQ8IW70 566 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 SRRM1Q8IYB3 904 aaKnown RBP12.35□□□□□ -0.43
LMNA-218ENST00000502357 CISD2Q8N5K1 135 aaKnown RBP12.35□□□□□ -0.43
LMNA-218ENST00000502357 RASGEF1AQ8N9B8 481 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 TMEM102Q8N9M5 508 aaPredicted RBP12.35□□□□□ -0.43
LMNA-218ENST00000502357 OR8K5Q8NH50 307 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 DTX3LQ8TDB6 740 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 MR1Q95460 341 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 SLC29A3Q9BZD2 475 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 SLAMF7Q9NQ25 335 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 C5AR2Q9P296 337 aa12.35□□□□□ -0.43
LMNA-218ENST00000502357 C2CD3Q4AC94 2353 aa12.34□□□□□ -0.43
LMNA-218ENST00000502357 PCM1Q15154 2024 aa12.34□□□□□ -0.43
LMNA-218ENST00000502357 H3BMH7 237 aa12.34□□□□□ -0.43
LMNA-218ENST00000502357 GPR39O43194 453 aa12.34□□□□□ -0.43
LMNA-218ENST00000502357 KCNJ13O60928 360 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms