RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 SLC34A3Q8N130 599 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 TEX26Q8N6G2 289 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 INPP5DQ92835 1189 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 GLYATL1Q969I3 302 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 ZNF501Q96CX3 271 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-209ENST00000498725 EID2BQ96D98 161 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 FCRL4Q96PJ5 515 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 SMAD5Q99717 465 aaKnown RBP8.92□□□□□ -0.98
CCDC171-209ENST00000498725 SLC7A5P2Q9GIP4 190 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 CLSTN2Q9H4D0 955 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 PCDH18Q9HCL0 1135 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 FAM8A1Q9UBU6 413 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 EPHA6Q9UF33 1036 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 B3GNT3Q9Y2A9 372 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 DOPEY1Q5JWR5 2465 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 SPTBP11277 2137 aa8.92□□□□□ -0.98
CCDC171-209ENST00000498725 OTOGQ6ZRI0 2925 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 C2orf72A6NCS6 295 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 OR6C74A6NCV1 312 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 TLCD2A6NGC4 264 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 ANKRD66B4E2M5 251 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 MEN1O00255 615 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 CHUKO15111 745 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 LDB2O43679 373 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 JCHAINP01591 159 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 SNRPB2P08579 225 aaKnown RBP8.91□□□□□ -0.98
CCDC171-209ENST00000498725 NUDT7P0C024 238 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 FERP16591 822 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 FECHP22830 423 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 PER3P56645 1201 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 GSDMDP57764 484 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 TUBB4BP68371 445 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 UBXN1Q04323 297 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 ABRQ12979 859 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 TUBB2AQ13885 445 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 DPYSL2Q16555 572 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 ANO6Q4KMQ2 910 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 PLEKHS1Q5SXH7 462 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 CCDC122Q5T0U0 273 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 TMTC4Q5T4D3 741 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 VWA5B1Q5TIE3 1220 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 IZUMO3Q5VZ72 239 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 ARMC6Q6NXE6 501 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 DUS1LQ6P1R4 473 aaKnown RBP8.91□□□□□ -0.98
CCDC171-209ENST00000498725 KLHL35Q6PF15 583 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 HPS6Q86YV9 775 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 PSTKQ8IV42 348 aaKnown RBP8.91□□□□□ -0.98
CCDC171-209ENST00000498725 ZNF547Q8IVP9 402 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 RBM12BQ8IXT5 1001 aaKnown RBP8.91□□□□□ -0.98
CCDC171-209ENST00000498725 DSELQ8IZU8 1212 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 TMEM102Q8N9M5 508 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-209ENST00000498725 GLIS1Q8NBF1 620 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 ARRDC2Q8TBH0 407 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 CPT1BQ92523 772 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 BTBD6Q96KE9 485 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 TIMM29Q9BSF4 260 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 TUBB2BQ9BVA1 445 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 NUP85Q9BW27 656 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 NLNQ9BYT8 704 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 GPR63Q9BZJ6 419 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 RAB33BQ9H082 229 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 ZFYVE1Q9HBF4 777 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 ZBTB20Q9HC78 741 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-209ENST00000498725 BPIFA1Q9NP55 256 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 IMP3Q9NV31 184 aaKnown RBP8.91□□□□□ -0.98
CCDC171-209ENST00000498725 HRASLS2Q9NWW9 162 aa8.91□□□□□ -0.98
CCDC171-209ENST00000498725 OR5K3A6NET4 321 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 TMEM150CB9EJG8 249 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 MATN3O15232 486 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 FTLP02792 175 aaPredicted RBP8.9□□□□□ -0.98
CCDC171-209ENST00000498725 CAPN1P07384 714 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 CD48P09326 243 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 RAB40ALP0C0E4 278 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 VCLP18206 1134 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 POLR2CP19387 275 aaPredicted RBP8.9□□□□□ -0.98
CCDC171-209ENST00000498725 CYP2A7P20853 494 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 UBE2HP62256 183 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 XRCC4Q13426 336 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 GTF2H3Q13889 308 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 BECN1Q14457 450 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 RPE65Q16518 533 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 PCSK7Q16549 785 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 AGAP9Q5VTM2 703 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 MLIPQ5VWP3 458 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 FAM198BQ6UWH4 519 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 ZNF517Q6ZMY9 492 aaPredicted RBP8.9□□□□□ -0.98
CCDC171-209ENST00000498725 FAM83HQ6ZRV2 1179 aaPredicted RBP8.9□□□□□ -0.98
CCDC171-209ENST00000498725 CUZD1Q86UP6 607 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 FJX1Q86VR8 437 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 BPHLQ86WA6 291 aaPredicted RBP8.9□□□□□ -0.98
CCDC171-209ENST00000498725 RAB43Q86YS6 212 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 SYTL1Q8IYJ3 562 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 D2HGDHQ8N465 521 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 ZADH2Q8N4Q0 377 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 TRAM1L1Q8N609 369 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 CCNYQ8ND76 341 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 UBE2Q2Q8WVN8 375 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 TTC25Q96NG3 672 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 LYSMD1Q96S90 227 aa8.9□□□□□ -0.98
CCDC171-209ENST00000498725 ZSCAN5AQ9BUG6 496 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms