RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 NPNTQ6UXI9 565 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 ASB18Q6ZVZ8 466 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 SIDT2Q8NBJ9 832 aaKnown RBP11.8□□□□□ -0.52
CNOT4-211ENST00000498534 DTX3LQ8TDB6 740 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 RSC1A1Q92681 617 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 RNF31Q96EP0 1072 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 TEKT5Q96M29 485 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 OLFM3Q96PB7 478 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 DDX56Q9NY93 547 aaKnown RBP11.8□□□□□ -0.52
CNOT4-211ENST00000498534 UBP1Q9NZI7 540 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 FAM153AQ9UHL3 310 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 RARRES3Q9UL19 164 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 PCDHGA6Q9Y5G7 932 aa11.8□□□□□ -0.52
CNOT4-211ENST00000498534 DNMT3AQ9Y6K1 912 aaPredicted RBP11.8□□□□□ -0.52
CNOT4-211ENST00000498534 SSU72P8A0A1W2PR75 194 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 C3orf70A6NLC5 250 aaPredicted RBP11.79□□□□□ -0.52
CNOT4-211ENST00000498534 C21orf140B9A014 251 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 AURKAO14965 403 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 MTSS1O43312 755 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 KRT1P04264 644 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 GP1BBP13224 206 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 TNNT1P13805 278 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 FECHP22830 423 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 SLC1A1P43005 524 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 RPS15P62841 145 aaKnown RBP11.79□□□□□ -0.52
CNOT4-211ENST00000498534 ACY1Q03154 408 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 TFDP2Q14188 446 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 PLCL1Q15111 1095 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 PPP2R5EQ16537 467 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 KHDC1Q4VXA5 237 aaKnown RBP11.79□□□□□ -0.52
CNOT4-211ENST00000498534 LDLRAP1Q5SW96 308 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 FAM182AQ5T1J6 154 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 B4GALNT4Q76KP1 1039 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 C11orf96Q7Z7L8 435 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 RHOT2Q8IXI1 618 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 RHOT1Q8IXI2 618 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 FAM26EQ8N5C1 309 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 BEND7Q8N7W2 519 aaPredicted RBP11.79□□□□□ -0.52
CNOT4-211ENST00000498534 TFB1MQ8WVM0 346 aaKnown RBP11.79□□□□□ -0.52
CNOT4-211ENST00000498534 CCDC42Q96M95 316 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 GPR87Q9BY21 358 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 IL26Q9NPH9 171 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 LHX9Q9NQ69 397 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 HACD3Q9P035 362 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 TLK1Q9UKI8 766 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 TMPRSS11EQ9UL52 423 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 PLAAQ9Y263 795 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 MAN2B2Q9Y2E5 1009 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 WDR37Q9Y2I8 494 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 PKP3Q9Y446 797 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 SPO11Q9Y5K1 396 aa11.79□□□□□ -0.52
CNOT4-211ENST00000498534 IGHV5-51A0A0C4DH38 117 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 LOC285095A0A1B0GVY8 99 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 UBA6A0AVT1 1052 aaPredicted RBP11.78□□□□□ -0.52
CNOT4-211ENST00000498534 UGT1A9O60656 530 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 TPM1P09493 284 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 FURINP09958 794 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 UGT1A6P19224 532 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 UGT1A1P22309 533 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 UGT1A4P22310 534 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 PTPN3P26045 913 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 SPAM1P38567 509 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 PMS2P54278 862 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 WNT3AP56704 352 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 HSD11B2P80365 405 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 DMPKQ09013 629 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 XRCC4Q13426 336 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 TUBB3Q13509 450 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 ITGA9Q13797 1035 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 RPE65Q16518 533 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 ASTE1Q2TB18 679 aaPredicted RBP11.78□□□□□ -0.52
CNOT4-211ENST00000498534 SIRPB2Q5JXA9 342 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 DNTTIP2Q5QJE6 756 aaKnown RBP11.78□□□□□ -0.52
CNOT4-211ENST00000498534 PWWP2BQ6NUJ5 590 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 ARMC6Q6NXE6 501 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 TMEM220Q6QAJ8 160 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 KMT5CQ86Y97 462 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 APLFQ8IW19 511 aaPredicted RBP11.78□□□□□ -0.52
CNOT4-211ENST00000498534 SLC25A41Q8N5S1 370 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 RASGEF1AQ8N9B8 481 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 CT55Q8WUE5 264 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 THAP4Q8WY91 577 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 SLC41A2Q96JW4 573 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 ZNF514Q96K75 400 aaPredicted RBP11.78□□□□□ -0.52
CNOT4-211ENST00000498534 CD180Q99467 661 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 UGT1A7Q9HAW7 530 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 UGT1A10Q9HAW8 530 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 UGT1A8Q9HAW9 530 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 FGF21Q9NSA1 209 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 HRASLS2Q9NWW9 162 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 SEMA5BQ9P283 1151 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 PSMD13Q9UNM6 376 aa11.78□□□□□ -0.52
CNOT4-211ENST00000498534 RELNP78509 3460 aa11.77□□□□□ -0.53
CNOT4-211ENST00000498534 GLYATL1P3A0A0U1RQE8 302 aa11.77□□□□□ -0.53
CNOT4-211ENST00000498534 FOLR1P15328 257 aa11.77□□□□□ -0.53
CNOT4-211ENST00000498534 NR1D1P20393 614 aa11.77□□□□□ -0.53
CNOT4-211ENST00000498534 MLLT10P55197 1068 aa11.77□□□□□ -0.53
CNOT4-211ENST00000498534 TRIM14Q14142 442 aa11.77□□□□□ -0.53
CNOT4-211ENST00000498534 PRKD1Q15139 912 aaPredicted RBP11.77□□□□□ -0.53
CNOT4-211ENST00000498534 CHRNA6Q15825 494 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms