RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 PEX13Q92968 403 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.57□□□□□ -0.4
HSPG2-213ENST00000498495 CXorf40BQ96DE9 158 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 LIN37Q96GY3 246 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-213ENST00000498495 LINC00615Q96LM1 132 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-213ENST00000498495 NAPGQ99747 312 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-213ENST00000498495 DPYSL5Q9BPU6 564 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 IL22Q9GZX6 179 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 ZMYND15Q9H091 742 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 CHRAC1Q9NRG0 131 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 SLC2A6Q9UGQ3 507 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 ANAPC5Q9UJX4 755 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 ACSL5Q9ULC5 683 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 PSMD13Q9UNM6 376 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 SAR1BQ9Y6B6 198 aa12.57□□□□□ -0.4
HSPG2-213ENST00000498495 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
HSPG2-213ENST00000498495 ZFC3H1O60293 1989 aaKnown RBP12.56□□□□□ -0.4
HSPG2-213ENST00000498495 TCRBV7S3A2A0A539 114 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 CTAGE9A4FU28 777 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 OR51F1A6NGY5 319 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 SRRM3A6NNA2 597 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-213ENST00000498495 DUX1O43812 170 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 GOT2P00505 430 aaKnown RBP12.56□□□□□ -0.4
HSPG2-213ENST00000498495 POLBP06746 335 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 BRAFP15056 766 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 FOXN2P32314 431 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 PPARGP37231 505 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-213ENST00000498495 NSG1P42857 185 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 PAFAH1B1P43034 410 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 MAPK9P45984 424 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 FNTAP49354 379 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 EPHA4P54764 986 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 UBE2IP63279 158 aaKnown RBP12.56□□□□□ -0.4
HSPG2-213ENST00000498495 ACVR1Q04771 509 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 PPP1R7Q15435 360 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 FASTKD1Q53R41 847 aaKnown RBP12.56□□□□□ -0.4
HSPG2-213ENST00000498495 LYPLAL1Q5VWZ2 237 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 TMEM71Q6P5X7 295 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 AFTPHQ6ULP2 937 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 ZNF574Q6ZN55 896 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-213ENST00000498495 FAM83HQ6ZRV2 1179 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-213ENST00000498495 TMEM26Q6ZUK4 368 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 MICALCLQ6ZW33 695 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 TMPRSS9Q7Z410 1059 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 PIANPQ8IYJ0 282 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 NCSTNQ92542 709 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 FGF11Q92914 225 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 TMEM159Q96B96 161 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 CAPZA3Q96KX2 299 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 ZNF778Q96MU6 729 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 ZNF578Q96N58 590 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-213ENST00000498495 SLC46A1Q96NT5 459 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 CMKLR1Q99788 373 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 NUDT22Q9BRQ3 303 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 TBC1D10AQ9BXI6 508 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 SEMA6CQ9H3T2 930 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 VPS37BQ9H9H4 285 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 POT1Q9NUX5 634 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 AKAP7Q9P0M2 348 aaPredicted RBP12.56□□□□□ -0.4
HSPG2-213ENST00000498495 FAM8A1Q9UBU6 413 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 WDR37Q9Y2I8 494 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 RAXQ9Y2V3 346 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 PCDHGA8Q9Y5G5 932 aa12.56□□□□□ -0.4
HSPG2-213ENST00000498495 IGLV3-16A0A075B6K0 115 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 C17orf113A0A1B0GUU1 675 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 OR52A4PA6NMU1 304 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 AGRPO00253 132 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 PLD2O14939 933 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 SGTAO43765 313 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 AP2A2O94973 939 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 TNFSF15O95150 251 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 JMJD7P0C870 316 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 HOXB3P14651 431 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-213ENST00000498495 AMD1P17707 334 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 MPSTP25325 297 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 MGAT1P26572 445 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 PRLHRP49683 370 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 LIMK2P53671 638 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 CRADDP78560 199 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 ITIH4Q14624 930 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 KCNJ11Q14654 390 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 DBN1Q16643 649 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 TBC1D25Q3MII6 688 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 ZNF449Q6P9G9 518 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 CERS6Q6ZMG9 384 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 CREG2Q8IUH2 290 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 SLITRK4Q8IW52 837 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 RBM12BQ8IXT5 1001 aaKnown RBP12.55□□□□□ -0.4
HSPG2-213ENST00000498495 CLDN19Q8N6F1 224 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 OR4D9Q8NGE8 314 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 CPT1BQ92523 772 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 CCDC97Q96F63 343 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-213ENST00000498495 CCM2Q9BSQ5 444 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 EPB41L1Q9H4G0 881 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 UCK1Q9HA47 277 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 SLC40A1Q9NP59 571 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 NEU2Q9Y3R4 380 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 UNC13CQ8NB66 2214 aa12.55□□□□□ -0.4
HSPG2-213ENST00000498495 PRAMEF33A0A0G2JMD5 474 aa12.54□□□□□ -0.4
HSPG2-213ENST00000498495 IGHV5-10-1A0A0J9YXX1 117 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms