RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 RAPSNQ13702 412 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 GTF2H3Q13889 308 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 GPR19Q15760 415 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 KHDC1Q4VXA5 237 aaKnown RBP13.63□□□□□ -0.23
CCDC58-207ENST00000498466 ZRANB3Q5FWF4 1079 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 FAM69BQ5VUD6 431 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 C1QL3Q5VWW1 255 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 ZNF517Q6ZMY9 492 aaPredicted RBP13.63□□□□□ -0.23
CCDC58-207ENST00000498466 MED25Q71SY5 747 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 TMC3Q7Z5M5 1100 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 IQCKQ8N0W5 287 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 D2HGDHQ8N465 521 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 TMEM102Q8N9M5 508 aaPredicted RBP13.63□□□□□ -0.23
CCDC58-207ENST00000498466 SLC38A9Q8NBW4 561 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 CCNYQ8ND76 341 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 GDAP1Q8TB36 358 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 PHF12Q96QT6 1004 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 CD180Q99467 661 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 GPR63Q9BZJ6 419 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 ASF1BQ9NVP2 202 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 NFKBIL1Q9UBC1 381 aaPredicted RBP13.63□□□□□ -0.23
CCDC58-207ENST00000498466 TCFL5Q9UL49 500 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 SRPK3Q9UPE1 567 aa13.63□□□□□ -0.23
CCDC58-207ENST00000498466 DOPEY1Q5JWR5 2465 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 OR5K3A6NET4 321 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 MEN1O00255 615 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 RAB40ALP0C0E4 278 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 MX2P20592 715 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 ELAVL4P26378 380 aaKnown RBP13.62□□□□□ -0.23
CCDC58-207ENST00000498466 GJC1P36383 396 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 RRADP55042 308 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 ITGA1P56199 1179 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 KLHL30Q0D2K2 578 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 TMEM115Q12893 351 aaPredicted RBP13.62□□□□□ -0.23
CCDC58-207ENST00000498466 DPYSL3Q14195 570 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 ELOAQ14241 798 aaKnown RBP13.62□□□□□ -0.23
CCDC58-207ENST00000498466 RPE65Q16518 533 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 KYNUQ16719 465 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 PLEKHN1Q494U1 663 aaPredicted RBP13.62□□□□□ -0.23
CCDC58-207ENST00000498466 TMTC4Q5T4D3 741 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 CCDC183Q5T5S1 534 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 LCN10Q6JVE6 187 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 APTXQ7Z2E3 356 aaKnown RBP13.62□□□□□ -0.23
CCDC58-207ENST00000498466 C11orf96Q7Z7L8 435 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 CISD2Q8N5K1 135 aaKnown RBP13.62□□□□□ -0.23
CCDC58-207ENST00000498466 NIPA2Q8N8Q9 360 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 GLIS1Q8NBF1 620 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 TTC13Q8NBP0 860 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 OR8K5Q8NH50 307 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 FAM71BQ8TC56 605 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 CPT1BQ92523 772 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 ZNF501Q96CX3 271 aaPredicted RBP13.62□□□□□ -0.23
CCDC58-207ENST00000498466 CLIP3Q96DZ5 547 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 TTC25Q96NG3 672 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 SMAD5Q99717 465 aaKnown RBP13.62□□□□□ -0.23
CCDC58-207ENST00000498466 NLNQ9BYT8 704 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 ISCUQ9H1K1 167 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 MAGEE1Q9HCI5 957 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 HRASLS2Q9NWW9 162 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 SOHLH2Q9NX45 425 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 IP6K2Q9UHH9 426 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 ANAPC7Q9UJX3 599 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 PSMD13Q9UNM6 376 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 ZNF711Q9Y462 761 aa13.62□□□□□ -0.23
CCDC58-207ENST00000498466 ABCA12Q86UK0 2595 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 ANKUB1A6NFN9 424 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 KCNK1O00180 336 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 ZBTB11O95625 1053 aaPredicted RBP13.61□□□□□ -0.23
CCDC58-207ENST00000498466 BPIP17213 487 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 GBE1Q04446 702 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 CDK18Q07002 472 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 PCSK7Q16549 785 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 HADHQ16836 314 aaKnown RBP13.61□□□□□ -0.23
CCDC58-207ENST00000498466 PLEKHS1Q5SXH7 462 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 PRAMEF17Q5VTA0 474 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 E4F1Q66K89 784 aaPredicted RBP13.61□□□□□ -0.23
CCDC58-207ENST00000498466 ARMC6Q6NXE6 501 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 AMZ2Q86W34 360 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 OOSP2Q86WS3 158 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 DSELQ8IZU8 1212 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 ZBTB2Q8N680 514 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 KCTD6Q8NC69 237 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 HDAC11Q96DB2 347 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 SGSM3Q96HU1 749 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 LRFN5Q96NI6 719 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 VPS35Q96QK1 796 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 FANCEQ9HB96 536 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 IMP3Q9NV31 184 aaKnown RBP13.61□□□□□ -0.23
CCDC58-207ENST00000498466 AIPL1Q9NZN9 384 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 TMPRSS11EQ9UL52 423 aa13.61□□□□□ -0.23
CCDC58-207ENST00000498466 F5H423 210 aaPredicted RBP13.6□□□□□ -0.23
CCDC58-207ENST00000498466 DDX3YO15523 660 aaKnown RBP13.6□□□□□ -0.23
CCDC58-207ENST00000498466 KCNJ13O60928 360 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 SKILP12757 684 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 PRKCIP41743 596 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 ARSEP51690 589 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 ATP1A4Q13733 1029 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 ATP13A5Q4VNC0 1218 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 ATP13A4Q4VNC1 1196 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 VWA5B1Q5TIE3 1220 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms