RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 CD274Q9NZQ7 290 aa7.97□□□□□ -1.13
PDZRN3-212ENST00000498048 VTI1BQ9UEU0 232 aa7.97□□□□□ -1.13
PDZRN3-212ENST00000498048 SUN2Q9UH99 717 aa7.97□□□□□ -1.13
PDZRN3-212ENST00000498048 CDYLQ9Y232 598 aa7.97□□□□□ -1.13
PDZRN3-212ENST00000498048 APOBEC2Q9Y235 224 aaKnown RBP7.97□□□□□ -1.13
PDZRN3-212ENST00000498048 COQ6Q9Y2Z9 468 aa7.97□□□□□ -1.13
PDZRN3-212ENST00000498048 STON1Q9Y6Q2 735 aa7.97□□□□□ -1.13
PDZRN3-212ENST00000498048 HEATR5BQ9P2D3 2071 aa7.97□□□□□ -1.13
PDZRN3-212ENST00000498048 LAMA3Q16787 3333 aa7.96□□□□□ -1.13
PDZRN3-212ENST00000498048 PABPN1LA6NDY0 278 aaKnown RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 CFAP73A6NFT4 308 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 TRPC5OSA6NMA1 111 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 E9PBE3 544 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 EIF3FO00303 357 aaPredicted RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 MATN2O00339 956 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 QSOX1O00391 747 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 WNT9AO14904 365 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 NPC1O15118 1278 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 RAD51BO15315 384 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 KLHL41O60662 606 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 HNRNPCL1O60812 293 aaKnown RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 MTX2O75431 263 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 ATP5HO75947 161 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 SIX3O95343 332 aaPredicted RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 ADH1BP00325 375 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 FTH1P02794 183 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 SERPINA6P08185 405 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 CBSLP0DN79 551 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 ENO3P13929 434 aaPredicted RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 MTHFD2P13995 350 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 HNRNPLP14866 589 aaKnown RBP eCLIP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 IMPDH1P20839 514 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 CTHP32929 405 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 CBSP35520 551 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 WASP42768 502 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 IDH3AP50213 366 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 NAA20P61599 178 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 B4GALNT1Q00973 533 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 TUBB3Q13509 450 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 UBAP2LQ14157 1087 aaKnown RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 COL19A1Q14993 1142 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 RBBP7Q16576 425 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 SLC9B1Q4ZJI4 515 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 UNC50Q53HI1 259 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 LDLRAP1Q5SW96 308 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 FAM46CQ5VWP2 391 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 RAET1GQ6H3X3 334 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 TXNDC11Q6PKC3 985 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 SBSNQ6UWP8 590 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 ERN2Q76MJ5 926 aaKnown RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 ZNF765Q7L2R6 523 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 CYP2U1Q7Z449 544 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 GPSM1Q86YR5 675 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 NRSN1Q8IZ57 195 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 PDPRQ8NCN5 879 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 MAPK15Q8TD08 544 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 STON2Q8WXE9 905 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 GLYATL1Q969I3 302 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 RAB7BQ96AH8 199 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 KLHL29Q96CT2 875 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 PPP1R36Q96LQ0 422 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 COQ10AQ96MF6 247 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 ASB2Q96Q27 587 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 VPS35Q96QK1 796 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 ACOX2Q99424 681 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 GAS2L1Q99501 681 aaPredicted RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 RPP25Q9BUL9 199 aaKnown RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 NUF2Q9BZD4 464 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 ZCCHC2Q9C0B9 1178 aaKnown RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 LRMDAQ9H2I8 198 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 TTYH1Q9H313 450 aaPredicted RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 TCF7L2Q9NQB0 619 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 PRSS16Q9NQE7 514 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 SAR1AQ9NR31 198 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 LATS2Q9NRM7 1088 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 UTP6Q9NYH9 597 aaKnown RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 ARMCX1Q9P291 453 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 EIF2B4Q9UI10 523 aaKnown RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 ZDHHC2Q9UIJ5 367 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 PPM1HQ9ULR3 514 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 F5P12259 2224 aa7.96□□□□□ -1.14
PDZRN3-212ENST00000498048 TDRD6O60522 2096 aaKnown RBP7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 GOLGA8QA0A0J9YX86 632 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 GOLGA8OA6NCC3 632 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 ANTXRLA6NF34 631 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 LRRC14BA6NHZ5 514 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 ANHXE9PGG2 379 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 SPECC1L-ADORA2AF8WAN1 911 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 GOLGA8NF8WBI6 632 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 H3BQ06 376 aaPredicted RBP7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 ZNF195O14628 629 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 GIPC1O14908 333 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 AREL1O15033 823 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 INPP4BO15327 924 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 MID1O15344 667 aa7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 LZTS3O60299 673 aaPredicted RBP7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 SYNCRIPO60506 623 aaKnown RBP7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 RNASEH1O60930 286 aaKnown RBP7.95□□□□□ -1.14
PDZRN3-212ENST00000498048 CRCPO75575 148 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms