RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CAMK2AQ9UQM7 478 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 CAPN7Q9Y6W3 813 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 ZHX2Q9Y6X8 837 aa3.37□□□□□ -1.87
SMC4-227ENST00000497984 FAM237AA0A1B0GTK4 181 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 SLCO1B7G3V0H7 640 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 PAGE4O60829 102 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 LIPFP07098 398 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 UBL4AP11441 157 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 PSMA4P25789 261 aaKnown RBP3.36□□□□□ -1.87
SMC4-227ENST00000497984 TLX1P31314 330 aaPredicted RBP3.36□□□□□ -1.87
SMC4-227ENST00000497984 HARS2P49590 506 aaKnown RBP3.36□□□□□ -1.87
SMC4-227ENST00000497984 DUOXA1Q1HG43 343 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 CTU2Q2VPK5 515 aaKnown RBP3.36□□□□□ -1.87
SMC4-227ENST00000497984 DPCR1Q3MIW9 517 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 ALFQ53S48 1182 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 ZNF611Q8N823 705 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 METTL6Q8TCB7 284 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 MRGPRDQ8TDS7 321 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 RFFLQ8WZ73 363 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 SGCDQ92629 289 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 SEC62Q99442 399 aaKnown RBP3.36□□□□□ -1.87
SMC4-227ENST00000497984 PKP2Q99959 881 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 PDCL3Q9H2J4 239 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 UNC45AQ9H3U1 944 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 DLGAP2Q9P1A6 1054 aa3.36□□□□□ -1.87
SMC4-227ENST00000497984 A0A1W2PPH5 198 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 NPIPB15A6NHN6 443 aaPredicted RBP3.35□□□□□ -1.87
SMC4-227ENST00000497984 PRR32B1ATL7 298 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 NPHP1O15259 732 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 DAB1O75553 588 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 MOCS3O95396 460 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 SHC1P29353 583 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 CASP6P55212 293 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 CSTF3Q12996 717 aaKnown RBP3.35□□□□□ -1.87
SMC4-227ENST00000497984 DCTN2Q13561 401 aaKnown RBP3.35□□□□□ -1.87
SMC4-227ENST00000497984 ADIPOQQ15848 244 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 CDONQ4KMG0 1287 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 HSP90AB4PQ58FF6 505 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 XKR6Q5GH73 641 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 MMS22LQ6ZRQ5 1243 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 PM20D2Q8IYS1 436 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 ZNF843Q8N446 348 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 PCYOX1LQ8NBM8 494 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 ETNPPLQ8TBG4 499 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 SMARCE1Q969G3 411 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 INTS12Q96CB8 462 aaKnown RBP3.35□□□□□ -1.87
SMC4-227ENST00000497984 PIP5K1AQ99755 562 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 RTP3Q9BQQ7 232 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 SIL1Q9H173 461 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 MAGIXQ9H6Y5 334 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 SCPEP1Q9HB40 452 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 STK39Q9UEW8 545 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 CSAG2Q9Y5P2 127 aa3.35□□□□□ -1.87
SMC4-227ENST00000497984 PI15O43692 258 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 JRKO75564 520 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 CCNDBP1O95273 360 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 KCNK5O95279 499 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 IPO7O95373 1038 aaKnown RBP3.34□□□□□ -1.87
SMC4-227ENST00000497984 NGFP01138 241 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 CLEC3BP05452 202 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 KRT19P08727 400 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 IL7RP16871 459 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 ANXA7P20073 488 aaKnown RBP3.34□□□□□ -1.87
SMC4-227ENST00000497984 EPHA2P29317 976 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 KCNJ10P78508 379 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 GTDC1Q4AE62 458 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 ASPRV1Q53RT3 343 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 NSUN5P2Q63ZY6 315 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 ZNF774Q6NX45 483 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 TSSK4Q6SA08 328 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 R3HCC1LQ7Z5L2 792 aaKnown RBP3.34□□□□□ -1.87
SMC4-227ENST00000497984 HACE1Q8IYU2 909 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 OR1J2Q8NGS2 313 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 MMABQ96EY8 250 aaPredicted RBP3.34□□□□□ -1.87
SMC4-227ENST00000497984 SLC47A1Q96FL8 570 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 FOXN4Q96NZ1 517 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 SMC6Q96SB8 1091 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 SEPT5Q99719 369 aaPredicted RBP3.34□□□□□ -1.87
SMC4-227ENST00000497984 RHNO1Q9BSD3 238 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 FGFBP2Q9BYJ0 223 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 C9orf78Q9NZ63 289 aaPredicted RBP3.34□□□□□ -1.87
SMC4-227ENST00000497984 PTTG2Q9NZH5 202 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 MKLN1Q9UL63 735 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 MAU2Q9Y6X3 613 aa3.34□□□□□ -1.87
SMC4-227ENST00000497984 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 TEX13DA0A0J9YY54 714 aaPredicted RBP3.33□□□□□ -1.88
SMC4-227ENST00000497984 A0A1W2PQF6 199 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 KANSL1LA0AUZ9 987 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 C1orf226A1L170 272 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 TGFB1I1O43294 461 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 HCRTR2O43614 444 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 AGR2O95994 175 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 HMBSP08397 361 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 DNAH10OSP0CZ25 163 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 CEBPBP17676 345 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 CDH2P19022 906 aaPredicted RBP3.33□□□□□ -1.88
SMC4-227ENST00000497984 ICAM3P32942 547 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 SLC6A12P48065 614 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 MMP15P51511 669 aa3.33□□□□□ -1.88
SMC4-227ENST00000497984 SNX16P57768 344 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms