RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 MAPK10P53779 464 aa15.08■□□□□ 0
NUP50-219ENST00000497960 EPHA4P54764 986 aa15.08■□□□□ 0
NUP50-219ENST00000497960 C16orf72Q14CZ0 275 aa15.08■□□□□ 0
NUP50-219ENST00000497960 PPP1R7Q15435 360 aa15.08■□□□□ 0
NUP50-219ENST00000497960 TRIP13Q15645 432 aaPredicted RBP15.08■□□□□ 0
NUP50-219ENST00000497960 SEPT7Q16181 437 aaKnown RBP15.08■□□□□ 0
NUP50-219ENST00000497960 DNTTIP2Q5QJE6 756 aaKnown RBP15.08■□□□□ 0
NUP50-219ENST00000497960 TMEM164Q5U3C3 297 aa15.08■□□□□ 0
NUP50-219ENST00000497960 AMZ2Q86W34 360 aa15.08■□□□□ 0
NUP50-219ENST00000497960 KLHDC8BQ8IXV7 354 aa15.08■□□□□ 0
NUP50-219ENST00000497960 RASGEF1AQ8N9B8 481 aa15.08■□□□□ 0
NUP50-219ENST00000497960 GLIS1Q8NBF1 620 aa15.08■□□□□ 0
NUP50-219ENST00000497960 FCRL3Q96P31 734 aaPredicted RBP15.08■□□□□ 0
NUP50-219ENST00000497960 EPB41L1Q9H4G0 881 aa15.08■□□□□ 0
NUP50-219ENST00000497960 PRORYQ9H606 182 aa15.08■□□□□ 0
NUP50-219ENST00000497960 ASB8Q9H765 288 aa15.08■□□□□ 0
NUP50-219ENST00000497960 LRRC40Q9H9A6 602 aa15.08■□□□□ 0
NUP50-219ENST00000497960 ARNT2Q9HBZ2 717 aa15.08■□□□□ 0
NUP50-219ENST00000497960 FKBPLQ9UIM3 349 aa15.08■□□□□ 0
NUP50-219ENST00000497960 KCTD3Q9Y597 815 aa15.08■□□□□ 0
NUP50-219ENST00000497960 MRFAP1Q9Y605 127 aa15.08■□□□□ 0
NUP50-219ENST00000497960 SCN8AQ9UQD0 1980 aa15.07■□□□□ 0
NUP50-219ENST00000497960 GAPDHSO14556 408 aaPredicted RBP15.07■□□□□ 0
NUP50-219ENST00000497960 GPR39O43194 453 aa15.07■□□□□ 0
NUP50-219ENST00000497960 SRP72O76094 671 aaKnown RBP15.07■□□□□ 0
NUP50-219ENST00000497960 METTL18O95568 372 aa15.07■□□□□ 0
NUP50-219ENST00000497960 KRT14P02533 472 aa15.07■□□□□ 0
NUP50-219ENST00000497960 THRAP10827 490 aa15.07■□□□□ 0
NUP50-219ENST00000497960 XRCC1P18887 633 aaPredicted RBP15.07■□□□□ 0
NUP50-219ENST00000497960 MPSTP25325 297 aa15.07■□□□□ 0
NUP50-219ENST00000497960 RPL10P27635 214 aaKnown RBP15.07■□□□□ 0
NUP50-219ENST00000497960 HADHAP40939 763 aa15.07■□□□□ 0
NUP50-219ENST00000497960 LMAN1P49257 510 aa15.07■□□□□ 0
NUP50-219ENST00000497960 TMPRSS3P57727 454 aa15.07■□□□□ 0
NUP50-219ENST00000497960 UBE2IP63279 158 aaKnown RBP15.07■□□□□ 0
NUP50-219ENST00000497960 CXADRP78310 365 aa15.07■□□□□ 0
NUP50-219ENST00000497960 BASP1P80723 227 aaKnown RBP15.07■□□□□ 0
NUP50-219ENST00000497960 CFHR1Q03591 330 aa15.07■□□□□ 0
NUP50-219ENST00000497960 TUBB2AQ13885 445 aa15.07■□□□□ 0
NUP50-219ENST00000497960 AGAP9Q5VTM2 703 aa15.07■□□□□ 0
NUP50-219ENST00000497960 KCTD11Q693B1 232 aa15.07■□□□□ 0
NUP50-219ENST00000497960 DENND5AQ6IQ26 1287 aa15.07■□□□□ 0
NUP50-219ENST00000497960 TMEM220Q6QAJ8 160 aa15.07■□□□□ 0
NUP50-219ENST00000497960 ABRAXAS1Q6UWZ7 409 aa15.07■□□□□ 0
NUP50-219ENST00000497960 C4orf22Q6V702 233 aa15.07■□□□□ 0
NUP50-219ENST00000497960 WASH2PQ6VEQ5 465 aa15.07■□□□□ 0
NUP50-219ENST00000497960 AGBL5Q8NDL9 886 aa15.07■□□□□ 0
NUP50-219ENST00000497960 RCBTB1Q8NDN9 531 aa15.07■□□□□ 0
NUP50-219ENST00000497960 NCSTNQ92542 709 aa15.07■□□□□ 0
NUP50-219ENST00000497960 USP7Q93009 1102 aa15.07■□□□□ 0
NUP50-219ENST00000497960 DCUN1D1Q96GG9 259 aa15.07■□□□□ 0
NUP50-219ENST00000497960 ZNF514Q96K75 400 aaPredicted RBP15.07■□□□□ 0
NUP50-219ENST00000497960 C19orf43Q9BQ61 176 aa15.07■□□□□ 0
NUP50-219ENST00000497960 TUBB2BQ9BVA1 445 aa15.07■□□□□ 0
NUP50-219ENST00000497960 UCK1Q9HA47 277 aa15.07■□□□□ 0
NUP50-219ENST00000497960 WASH6PQ9NQA3 447 aa15.07■□□□□ 0
NUP50-219ENST00000497960 RAB6BQ9NRW1 208 aa15.07■□□□□ 0
NUP50-219ENST00000497960 WDR70Q9NW82 654 aa15.07■□□□□ 0
NUP50-219ENST00000497960 SCHIP1Q9P0W5 487 aaPredicted RBP15.07■□□□□ 0
NUP50-219ENST00000497960 DNMT3AQ9Y6K1 912 aaPredicted RBP15.07■□□□□ 0
NUP50-219ENST00000497960 LILRA5A6NI73 299 aa15.06■□□□□ 0
NUP50-219ENST00000497960 OR2AG2A6NM03 316 aa15.06■□□□□ 0
NUP50-219ENST00000497960 ZNF500O60304 480 aaPredicted RBP15.06■□□□□ 0
NUP50-219ENST00000497960 POP7O75817 140 aaKnown RBP15.06■□□□□ 0
NUP50-219ENST00000497960 ITGALP20701 1170 aa15.06■□□□□ 0
NUP50-219ENST00000497960 RPL22P35268 128 aaKnown RBP15.06■□□□□ 0
NUP50-219ENST00000497960 ETV5P41161 510 aa15.06■□□□□ 0
NUP50-219ENST00000497960 SLC19A1P41440 591 aa15.06■□□□□ 0
NUP50-219ENST00000497960 HALP42357 657 aa15.06■□□□□ 0
NUP50-219ENST00000497960 ZNF140P52738 457 aaPredicted RBP15.06■□□□□ 0
NUP50-219ENST00000497960 CTSCP53634 463 aa15.06■□□□□ 0
NUP50-219ENST00000497960 TERF1P54274 439 aa15.06■□□□□ 0
NUP50-219ENST00000497960 TMPRSS15P98073 1019 aa15.06■□□□□ 0
NUP50-219ENST00000497960 DR1Q01658 176 aa15.06■□□□□ 0
NUP50-219ENST00000497960 MSLNQ13421 630 aaPredicted RBP15.06■□□□□ 0
NUP50-219ENST00000497960 KCTD19Q17RG1 926 aaPredicted RBP15.06■□□□□ 0
NUP50-219ENST00000497960 WDR74Q6RFH5 385 aaPredicted RBP15.06■□□□□ 0
NUP50-219ENST00000497960 TMEM26Q6ZUK4 368 aa15.06■□□□□ 0
NUP50-219ENST00000497960 GPR155Q7Z3F1 870 aa15.06■□□□□ 0
NUP50-219ENST00000497960 C11orf96Q7Z7L8 435 aa15.06■□□□□ 0
NUP50-219ENST00000497960 LINC00523Q86TU6 105 aa15.06■□□□□ 0
NUP50-219ENST00000497960 SPATA4Q8NEY3 305 aa15.06■□□□□ 0
NUP50-219ENST00000497960 OR13C4Q8NGS5 318 aa15.06■□□□□ 0
NUP50-219ENST00000497960 ULK4Q96C45 1275 aa15.06■□□□□ 0
NUP50-219ENST00000497960 CXorf40BQ96DE9 158 aa15.06■□□□□ 0
NUP50-219ENST00000497960 KRT12Q99456 494 aa15.06■□□□□ 0
NUP50-219ENST00000497960 B3GNT4Q9C0J1 378 aa15.06■□□□□ 0
NUP50-219ENST00000497960 POT1Q9NUX5 634 aa15.06■□□□□ 0
NUP50-219ENST00000497960 TMEM9Q9P0T7 183 aa15.06■□□□□ 0
NUP50-219ENST00000497960 ASIC3Q9UHC3 531 aa15.06■□□□□ 0
NUP50-219ENST00000497960 CRLS1Q9UJA2 301 aa15.06■□□□□ 0
NUP50-219ENST00000497960 ACSL6Q9UKU0 697 aa15.06■□□□□ 0
NUP50-219ENST00000497960 PRAMEF33A0A0G2JMD5 474 aa15.05■□□□□ -0
NUP50-219ENST00000497960 PRR19A6NJB7 356 aa15.05■□□□□ -0
NUP50-219ENST00000497960 PRAMEF10O60809 474 aa15.05■□□□□ -0
NUP50-219ENST00000497960 AP2A1O95782 977 aa15.05■□□□□ -0
NUP50-219ENST00000497960 RALBP11234 206 aa15.05■□□□□ -0
NUP50-219ENST00000497960 CCL4P13236 92 aa15.05■□□□□ -0
NUP50-219ENST00000497960 TPH1P17752 444 aa15.05■□□□□ -0
NUP50-219ENST00000497960 CD82P27701 267 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms