RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ZCCHC2Q9C0B9 1178 aaKnown RBP13.95□□□□□ -0.18
VARS-228ENST00000495010 XPO4Q9C0E2 1151 aaKnown RBP13.95□□□□□ -0.18
VARS-228ENST00000495010 SOHLH2Q9NX45 425 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 SEMA5BQ9P283 1151 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 PSMD13Q9UNM6 376 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 BZW2Q9Y6E2 419 aaKnown RBP13.95□□□□□ -0.18
VARS-228ENST00000495010 MYO9AB2RTY4 2548 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 A6NL46 340 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 ZNF185O15231 689 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 TMEM63AO94886 807 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 CYP1A2P05177 515 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 RNF224P0DH78 156 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 IFI35P80217 286 aaPredicted RBP13.94□□□□□ -0.18
VARS-228ENST00000495010 CDK18Q07002 472 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 PPIDQ08752 370 aaKnown RBP13.94□□□□□ -0.18
VARS-228ENST00000495010 ZBTB17Q13105 803 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 XRCC4Q13426 336 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 GPR19Q15760 415 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 RPE65Q16518 533 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 KHDC1Q4VXA5 237 aaKnown RBP13.94□□□□□ -0.18
VARS-228ENST00000495010 PRR30Q53SZ7 412 aaPredicted RBP13.94□□□□□ -0.18
VARS-228ENST00000495010 IZUMO3Q5VZ72 239 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 ZNF787Q6DD87 383 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 CERS6Q6ZMG9 384 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 OOSP2Q86WS3 158 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 D2HGDHQ8N465 521 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 CHST8Q9H2A9 424 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 FANCEQ9HB96 536 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 BPIFA1Q9NP55 256 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 HRASLS2Q9NWW9 162 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 ESPL1Q14674 2120 aa13.94□□□□□ -0.18
VARS-228ENST00000495010 SSU72P8A0A1W2PR75 194 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 OR5K3A6NET4 321 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 SMTNL1A8MU46 457 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 POP7O75817 140 aaKnown RBP13.93□□□□□ -0.18
VARS-228ENST00000495010 ZBTB11O95625 1053 aaPredicted RBP13.93□□□□□ -0.18
VARS-228ENST00000495010 RAB40ALP0C0E4 278 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 COL8A1P27658 744 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 TNNT3P45378 269 aaPredicted RBP13.93□□□□□ -0.18
VARS-228ENST00000495010 RRADP55042 308 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 SLC10A2Q12908 348 aaPredicted RBP13.93□□□□□ -0.18
VARS-228ENST00000495010 GPS2Q13227 327 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 ATP13A5Q4VNC0 1218 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 MED25Q71SY5 747 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 C11orf96Q7Z7L8 435 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 PQLC3Q8N755 202 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 CNTD1Q8N815 330 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 ENDOVQ8N8Q3 282 aaKnown RBP13.93□□□□□ -0.18
VARS-228ENST00000495010 FDCSPQ8NFU4 85 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 GPR150Q8NGU9 434 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.93□□□□□ -0.18
VARS-228ENST00000495010 CPT1BQ92523 772 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 PNPLA2Q96AD5 504 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 CLIP3Q96DZ5 547 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 IMP4Q96G21 291 aaKnown RBP13.93□□□□□ -0.18
VARS-228ENST00000495010 AGAP3Q96P47 875 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 TRIB3Q96RU7 358 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 CEP41Q9BYV8 373 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 SLC7A5P2Q9GIP4 190 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 IMP3Q9NV31 184 aaKnown RBP13.93□□□□□ -0.18
VARS-228ENST00000495010 GPR83Q9NYM4 423 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 HEY1Q9Y5J3 304 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 NBPF19A0A087WUL8 3843 aa13.93□□□□□ -0.18
VARS-228ENST00000495010 RP1L1Q8IWN7 2480 aaPredicted RBP13.92□□□□□ -0.18
VARS-228ENST00000495010 CEACAM4O75871 244 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 VAV2P52735 878 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 ELOAQ14241 798 aaKnown RBP13.92□□□□□ -0.18
VARS-228ENST00000495010 PPP2R5EQ16537 467 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 LDLRAP1Q5SW96 308 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 ZDHHC20Q5W0Z9 365 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 SLC6A19Q695T7 634 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 TMEM102Q8N9M5 508 aaPredicted RBP13.92□□□□□ -0.18
VARS-228ENST00000495010 FAF2Q96CS3 445 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 ZNF501Q96CX3 271 aaPredicted RBP13.92□□□□□ -0.18
VARS-228ENST00000495010 SGSM3Q96HU1 749 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 NUDT9Q9BW91 350 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 MAK16Q9BXY0 300 aaKnown RBP13.92□□□□□ -0.18
VARS-228ENST00000495010 NLNQ9BYT8 704 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 SLC25A51Q9H1U9 297 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 CTTNBP2NLQ9P2B4 639 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 TCFL5Q9UL49 500 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 GTF3C3Q9Y5Q9 886 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 UNC79Q9P2D8 2635 aa13.92□□□□□ -0.18
VARS-228ENST00000495010 OR6C74A6NCV1 312 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 MEN1O00255 615 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 MAP3K7O43318 606 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 NDST3O95803 873 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 SERPING1P05155 500 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 MTHFD1P11586 935 aaKnown RBP13.91□□□□□ -0.18
VARS-228ENST00000495010 KDELR1P24390 212 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 PBLDP30039 288 aaPredicted RBP13.91□□□□□ -0.18
VARS-228ENST00000495010 DCTP40126 519 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 DMPKQ09013 629 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 PRKAA1Q13131 559 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 LAMB3Q13751 1172 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 KRT33BQ14525 404 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 PDK1Q15118 436 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 NR6A1Q15406 480 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 KYNUQ16719 465 aa13.91□□□□□ -0.18
VARS-228ENST00000495010 ALKBH5Q6P6C2 394 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms