RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	CEACAM5	P06731	702 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	DGKA	P23743	735 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	MAGEA12	P43365	314 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	TAS2R39	P59534	338 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	PPARD	Q03181	441 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	RPA4	Q13156	261 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	BMPR2	Q13873	1038 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	TSNAXIP1	Q2TAA8	658 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	ZNF789	Q5FWF6	425 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	PLEKHS1	Q5SXH7	462 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	KLC3	Q6P597	504 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	ZNF549	Q6P9A3	640 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	ARMCX6	Q7L4S7	300 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	DET1	Q7L5Y6	550 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	TRABD2A	Q86V40	505 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	AMZ2	Q86W34	360 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	ZBTB2	Q8N680	514 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	CLDN19	Q8N6F1	224 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	BEND7	Q8N7W2	519 aa	Predicted RBP	13.34	□□□□□ -0.27
APTX-231	ENST00000494973	ELMO1	Q92556	727 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	TMEM159	Q96B96	161 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	SGF29	Q96ES7	293 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	NDN	Q99608	321 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	LGR4	Q9BXB1	951 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	GPAM	Q9HCL2	828 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	SSU72	Q9NP77	194 aa	Known RBP	13.34	□□□□□ -0.27
APTX-231	ENST00000494973	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.34	□□□□□ -0.27
APTX-231	ENST00000494973	MKS1	Q9NXB0	559 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	CTNNAL1	Q9UBT7	734 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	MTO1	Q9Y2Z2	717 aa	Known RBP	13.34	□□□□□ -0.27
APTX-231	ENST00000494973	ACOT9	Q9Y305	439 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	DHRS7	Q9Y394	339 aa		13.34	□□□□□ -0.27
APTX-231	ENST00000494973	DOCK9	Q9BZ29	2069 aa		13.33	□□□□□ -0.27
APTX-231	ENST00000494973	PIKFYVE	Q9Y2I7	2098 aa		13.33	□□□□□ -0.27
APTX-231	ENST00000494973		H0Y8X5	98 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	TPP1	O14773	563 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	YKT6	O15498	198 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	DFNA5	O60443	496 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	DNAJC6	O75061	913 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	NIPSNAP2	O75323	286 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	SASH3	O75995	380 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	TNF	P01375	233 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	ALDOA	P04075	364 aa	Known RBP	13.33	□□□□□ -0.28
APTX-231	ENST00000494973	GSTA1	P08263	222 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	ZNF37A	P17032	561 aa	Predicted RBP	13.33	□□□□□ -0.28
APTX-231	ENST00000494973	SAT1	P21673	171 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	CA5A	P35218	305 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	CCT5	P48643	541 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	NXPH1	P58417	271 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	IL2	P60568	153 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	SRP54	P61011	504 aa	Known RBP	13.33	□□□□□ -0.28
APTX-231	ENST00000494973	DMPK	Q09013	629 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	DUOXA1	Q1HG43	343 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	INSC	Q1MX18	579 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	KHDC1	Q4VXA5	237 aa	Known RBP	13.33	□□□□□ -0.28
APTX-231	ENST00000494973	TNFAIP8L3	Q5GJ75	292 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	RBM20	Q5T481	1227 aa	Known RBP	13.33	□□□□□ -0.28
APTX-231	ENST00000494973	CRTC3	Q6UUV7	619 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	IL27RA	Q6UWB1	636 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	PRR23B	Q6ZRT6	265 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	NEK10	Q6ZWH5	1172 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	SDR16C5	Q8N3Y7	309 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	DEFB119	Q8N690	84 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	OR2L2	Q8NH16	312 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	C1orf216	Q8TAB5	229 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	MZB1	Q8WU39	189 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	GLMN	Q92990	594 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	ATP6V1G3	Q96LB4	118 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	GPR21	Q99679	349 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	ZDHHC5	Q9C0B5	715 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	IQCG	Q9H095	443 aa	Known RBP	13.33	□□□□□ -0.28
APTX-231	ENST00000494973	DPEP2	Q9H4A9	486 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	ERVMER34-1	Q9H9K5	563 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	CARS2	Q9HA77	564 aa	Known RBP	13.33	□□□□□ -0.28
APTX-231	ENST00000494973	FGF22	Q9HCT0	170 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	ZNHIT2	Q9UHR6	403 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	MOSPD1	Q9UJG1	213 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	PILRB	Q9UKJ0	227 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	SUFU	Q9UMX1	484 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	SMG5	Q9UPR3	1016 aa	Known RBP	13.33	□□□□□ -0.28
APTX-231	ENST00000494973	CA5B	Q9Y2D0	317 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	TMEM98	Q9Y2Y6	226 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	PRSS21	Q9Y6M0	314 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	ABCA7	Q8IZY2	2146 aa		13.33	□□□□□ -0.28
APTX-231	ENST00000494973	VCAN	P13611	3396 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	FANCM	Q8IYD8	2048 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.32	□□□□□ -0.28
APTX-231	ENST00000494973		A0A096LPK6	155 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	HMX2	A2RU54	273 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	TMEM202	A6NGA9	273 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	AGPS	O00116	658 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	GLRA3	O75311	464 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	SLC2A4	P14672	509 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	ITPKA	P23677	461 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	CCNF	P41002	786 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	ABCG1	P45844	678 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	CLCN7	P51798	805 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	CLCNKA	P51800	687 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	CTSC	P53634	463 aa		13.32	□□□□□ -0.28
APTX-231	ENST00000494973	ATP6V0D1	P61421	351 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms