RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 LEFTY1O75610 366 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 RSL1D1O76021 490 aaKnown RBP10.25□□□□□ -0.77
SAMM50-206ENST00000494795 IGSF6O95976 241 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 HLA-EP13747 358 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 IL12AP29459 219 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 PRDX6P30041 224 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 CCR7P32248 378 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 ETV3P41162 512 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 ZFP36L2P47974 494 aaKnown RBP10.25□□□□□ -0.77
SAMM50-206ENST00000494795 UFM1P61960 85 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 FPGSQ05932 587 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 SKIV2LQ15477 1246 aaKnown RBP10.25□□□□□ -0.77
SAMM50-206ENST00000494795 ARSIQ5FYB1 569 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 ANKS6Q68DC2 871 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 Q6ZSR9 355 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 HSD11B1LQ7Z5J1 315 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 KBTBD6Q86V97 674 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 ELMOD1Q8N336 334 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 PYCR2Q96C36 320 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 MTFMTQ96DP5 389 aaKnown RBP10.25□□□□□ -0.77
SAMM50-206ENST00000494795 CLPBQ9H078 707 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 PIF1Q9H611 641 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 POPDC3Q9HBV1 291 aa10.25□□□□□ -0.77
SAMM50-206ENST00000494795 PLXNB3Q9ULL4 1909 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 BAIAP3O94812 1187 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 PENKP01210 267 aaPredicted RBP10.24□□□□□ -0.77
SAMM50-206ENST00000494795 ESR1P03372 595 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 HSPA8P11142 646 aaKnown RBP10.24□□□□□ -0.77
SAMM50-206ENST00000494795 PBX2P40425 430 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 SLC6A11P48066 632 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 PSME3P61289 254 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 LAMB3Q13751 1172 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 MMEL1Q495T6 779 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 Q6ZVL8 140 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 SNX20Q7Z614 316 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 ZNF483Q8TF39 744 aaPredicted RBP10.24□□□□□ -0.77
SAMM50-206ENST00000494795 NXPE3Q969Y0 559 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 ZNF707Q96C28 371 aaPredicted RBP10.24□□□□□ -0.77
SAMM50-206ENST00000494795 RAD9AQ99638 391 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 EBF3Q9H4W6 596 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 SARDHQ9UL12 918 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 HS3ST2Q9Y278 367 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 ACOT8O14734 319 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 KLK8O60259 260 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 PYGLP06737 847 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 CA3P07451 260 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 SERPINA4P29622 427 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 AQP4P55087 323 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 GALNT1Q10472 559 aaPredicted RBP10.24□□□□□ -0.77
SAMM50-206ENST00000494795 CDC16Q13042 620 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 ZNF77Q15935 545 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 SGO1Q5FBB7 561 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 PRSS36Q5K4E3 855 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 GOLGA7Q7Z5G4 137 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 CACUL1Q86Y37 369 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 SLC22A15Q8IZD6 547 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 NKAPQ8N5F7 415 aaKnown RBP10.24□□□□□ -0.77
SAMM50-206ENST00000494795 PHC3Q8NDX5 983 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 OR4F6Q8NGB9 312 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 ECHDC3Q96DC8 303 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 SCRN2Q96FV2 425 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 MRGPRX3Q96LB0 322 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 GCNAQ96QF7 691 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 TMEM79Q9BSE2 394 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 RETREG1Q9H6L5 497 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 COPS7BQ9H9Q2 264 aaPredicted RBP10.24□□□□□ -0.77
SAMM50-206ENST00000494795 EFCAB1Q9HAE3 211 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 NDE1Q9NXR1 346 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 STK39Q9UEW8 545 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 CORO1CQ9ULV4 474 aaPredicted RBP10.24□□□□□ -0.77
SAMM50-206ENST00000494795 COQ6Q9Y2Z9 468 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 LAMA1P25391 3075 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 MTCL1Q9Y4B5 1905 aaKnown RBP10.24□□□□□ -0.77
SAMM50-206ENST00000494795 FFAR2O15552 330 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 SNX2O60749 519 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 B3GALT4O96024 378 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 CAPN1P07384 714 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 FGF4P08620 206 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 PSMC3P17980 439 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 CLNS1AP54105 237 aaKnown RBP10.24□□□□□ -0.77
SAMM50-206ENST00000494795 HSPA14Q0VDF9 509 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 FLOT2Q14254 428 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 GRIN2CQ14957 1233 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 ABRAXAS2Q15018 415 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 PAGE3Q5JUK9 113 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 MPP7Q5T2T1 576 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 GPRC6AQ5T6X5 926 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 PGAM4Q8N0Y7 254 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 NXPE1Q8N323 547 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 ATP6V1E2Q96A05 226 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 EMILIN2Q9BXX0 1053 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 SLC52A3Q9NQ40 469 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 ZNHIT2Q9UHR6 403 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 COMMD10Q9Y6G5 202 aa10.24□□□□□ -0.77
SAMM50-206ENST00000494795 OR2AG2A6NM03 316 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 UPK3BL1B0FP48 263 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 UPK3BL2E5RIL1 263 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 MRASO14807 208 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 CYBBP04839 570 aa10.23□□□□□ -0.77
SAMM50-206ENST00000494795 SNRPB2P08579 225 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms