RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 GRIK1P39086 918 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 INCA1Q0VD86 236 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 BAATQ14032 418 aaPredicted RBP10.02□□□□□ -0.8
LINC00488-201ENST00000494582 RCAN2Q14206 197 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 AAK1Q2M2I8 961 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 SUPT20HL1Q3ZLR7 823 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 OTUD1Q5VV17 481 aaPredicted RBP10.02□□□□□ -0.8
LINC00488-201ENST00000494582 JADE1Q6IE81 842 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 SDE2Q6IQ49 451 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 ADAMTSL2Q86TH1 951 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 NOXA1Q86UR1 476 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 CNTN4Q8IWV2 1026 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 NPWQ8N729 165 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.02□□□□□ -0.8
LINC00488-201ENST00000494582 PPP1R13LQ8WUF5 828 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 SLC35F5Q8WV83 523 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 GTF2H4Q92759 462 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 TUBGCP3Q96CW5 907 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 PDLIM5Q96HC4 596 aaKnown RBP10.02□□□□□ -0.8
LINC00488-201ENST00000494582 OR2A14Q96R47 310 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 MRPL4Q9BYD3 311 aaKnown RBP10.02□□□□□ -0.8
LINC00488-201ENST00000494582 NXF2Q9GZY0 626 aaKnown RBP10.02□□□□□ -0.8
LINC00488-201ENST00000494582 ALG9Q9H6U8 611 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 C12orf4Q9NQ89 552 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 ABI2Q9NYB9 513 aaPredicted RBP10.02□□□□□ -0.8
LINC00488-201ENST00000494582 USE1Q9NZ43 259 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 U3KQV3 271 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 SHROOM3Q8TF72 1996 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 CNTNAP1P78357 1384 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 M0R082 166 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 TRIM16O95361 564 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 CST1P01037 141 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 GJB1P08034 283 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 RYKP34925 604 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 NPY2RP49146 381 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 EMX2Q04743 252 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 PRKCDQ05655 676 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 HSPA14Q0VDF9 509 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 FADDQ13158 208 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 SIM2Q14190 667 aaPredicted RBP10.02□□□□□ -0.81
LINC00488-201ENST00000494582 ERAP2Q6P179 960 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 IDO2Q6ZQW0 420 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 ACOT1Q86TX2 421 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 TCAIMQ8N3R3 496 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 FBXL6Q8N531 539 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 APPL2Q8NEU8 664 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 TTC9Q92623 222 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 EXT2Q93063 718 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 PPM1MQ96MI6 270 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 RDH12Q96NR8 316 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 PHOX2BQ99453 314 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 BBS2Q9BXC9 721 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 RETREG1Q9H6L5 497 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 SYTL2Q9HCH5 934 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 ANKHQ9HCJ1 492 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 TMEM39AQ9NV64 488 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 VNN3Q9NY84 501 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 NEUROG3Q9Y4Z2 214 aa10.02□□□□□ -0.81
LINC00488-201ENST00000494582 A0A087X1B8 175 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 LACTBL1A8MY62 500 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 H0Y626 953 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 ZNF780AO75290 641 aaPredicted RBP10.01□□□□□ -0.81
LINC00488-201ENST00000494582 EEDO75530 441 aaKnown RBP10.01□□□□□ -0.81
LINC00488-201ENST00000494582 PRKCBP05771 671 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 CPB1P15086 417 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 JUNDP17535 347 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 CTRB1P17538 263 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 EPHA2P29317 976 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 UQCRC1P31930 480 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 CLK1P49759 484 aaKnown RBP10.01□□□□□ -0.81
LINC00488-201ENST00000494582 CTAG1AP78358 180 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 PLIN5Q00G26 463 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 GALNT1Q10472 559 aaPredicted RBP10.01□□□□□ -0.81
LINC00488-201ENST00000494582 MXD4Q14582 209 aaPredicted RBP10.01□□□□□ -0.81
LINC00488-201ENST00000494582 PTCHD3Q3KNS1 767 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 FBXO48Q5FWF7 155 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 SYPL2Q5VXT5 272 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 CTRB2Q6GPI1 263 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 PROSER1Q86XN7 944 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 SP8Q8IXZ3 490 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 MICU2Q8IYU8 434 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 CHPFQ8IZ52 775 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 CLYBLQ8N0X4 340 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 SPATA22Q8NHS9 363 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 GRPEL2Q8TAA5 225 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 TRIM63Q969Q1 353 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 PMEPA1Q969W9 287 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 CCDC120Q96HB5 630 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 NUAK2Q9H093 628 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 MRM3Q9HC36 420 aaKnown RBP10.01□□□□□ -0.81
LINC00488-201ENST00000494582 TM9SF3Q9HD45 589 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 MID1IP1Q9NPA3 183 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 ENTPD7Q9NQZ7 604 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 POLR3BQ9NW08 1133 aaPredicted RBP10.01□□□□□ -0.81
LINC00488-201ENST00000494582 NUFIP1Q9UHK0 495 aaKnown RBP10.01□□□□□ -0.81
LINC00488-201ENST00000494582 UBR3Q6ZT12 1888 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 CLDN24A6NM45 220 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 I6L893 689 aaPredicted RBP10.01□□□□□ -0.81
LINC00488-201ENST00000494582 DCLK1O15075 740 aa10.01□□□□□ -0.81
LINC00488-201ENST00000494582 SHOXO15266 292 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms