RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 DNMT3AQ9Y6K1 912 aaPredicted RBP13.16□□□□□ -0.3
CTDSP1-212ENST00000494067 MN1Q10571 1320 aaPredicted RBP13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 AHCTF1Q8WYP5 2266 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 GRID2IPA4D2P6 1211 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 C2orf81A6NN90 581 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 APOC4-APOC2K7ER74 178 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 STX7O15400 261 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 PJA2O43164 708 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 ZNF189O75820 626 aaPredicted RBP13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 STK17BO94768 372 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 APOC2P02655 101 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 C9P02748 559 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 PTMAP06454 111 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 FAM87AP0C7U9 286 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 PYGMP11217 842 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 TYRP1P17643 537 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 MSH3P20585 1137 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 ADRA1AP35348 466 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 CCR10P46092 362 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 ABHD18Q0P651 414 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 CLCA4Q14CN2 919 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 AGAP9Q5VTM2 703 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 TIPARPQ7Z3E1 657 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 AMZ2Q86W34 360 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 ESX1Q8N693 406 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 RASGEF1AQ8N9B8 481 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 ACTL9Q8TC94 416 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 MRFAP1L1Q96HT8 127 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 TGM7Q96PF1 710 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 PPP1R2P1Q96PQ5 205 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 APOL2Q9BQE5 337 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 FICDQ9BVA6 458 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 SLC12A9Q9BXP2 914 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 GBA3Q9H227 469 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 ADNPQ9H2P0 1102 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 PILRAQ9UKJ1 303 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 AAR2Q9Y312 384 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 ARL5AQ9Y689 179 aa13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 SPENQ96T58 3664 aaKnown RBP13.15□□□□□ -0.3
CTDSP1-212ENST00000494067 SETXQ7Z333 2677 aaKnown RBP13.15□□□□□ -0.31
CTDSP1-212ENST00000494067 TENM4Q6N022 2769 aa13.15□□□□□ -0.31
CTDSP1-212ENST00000494067 MACROD2A1Z1Q3 448 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 PYCARD-AS1I3L0S3 204 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 POP7O75817 140 aaKnown RBP13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 PSMB4P28070 264 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 AKT1P31749 480 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 LEPRP48357 1165 aaKnown RBP13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 PPP1CAP62136 330 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 PDE1BQ01064 536 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 IL11RAQ14626 422 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 LONRF2Q1L5Z9 754 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 ATG14Q6ZNE5 492 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 RASGRP3Q8IV61 690 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 CDKL3Q8IVW4 592 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 BEND7Q8N7W2 519 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 GPR150Q8NGU9 434 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 RSC1A1Q92681 617 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 SLC45A3Q96JT2 553 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 ZNF514Q96K75 400 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 ULBP3Q9BZM4 244 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 SLC40A1Q9NP59 571 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 GEMIN8Q9NWZ8 242 aaKnown RBP13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 SIDT1Q9NXL6 827 aaKnown RBP13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 PACSIN2Q9UNF0 486 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 TMEM184BQ9Y519 407 aaPredicted RBP13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 PCDHB3Q9Y5E6 796 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 BOD1L1Q8NFC6 3051 aa13.14□□□□□ -0.31
CTDSP1-212ENST00000494067 CCDC66A2RUB6 948 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 KLHL33A6NCF5 533 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 C5orf60A6NFR6 353 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 BTNL10A8MVZ5 291 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 SGTAO43765 313 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 CRTAMO95727 393 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 CCNYL3P0C7X3 344 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 RALBP11234 206 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 LPOP22079 712 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 PTPN7P35236 360 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 ARL4DP49703 201 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 SEPHS1P49903 392 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 KCNC4Q03721 635 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 MAP7Q14244 749 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 GPR18Q14330 331 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 PLCL1Q15111 1095 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 TAF1AQ15573 450 aaPredicted RBP13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 ANKRD20A2Q5SQ80 823 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 GPRC6AQ5T6X5 926 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 ANKRD20A1Q5TYW2 823 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 CACHD1Q5VU97 1274 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 ANKRD20A3Q5VUR7 823 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 DENND5AQ6IQ26 1287 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 IRGCQ6NXR0 463 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 DARS2Q6PI48 645 aaKnown RBP13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 TMEM220Q6QAJ8 160 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 RANBP10Q6VN20 620 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 TMTC1Q8IUR5 882 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 DDHD1Q8NEL9 900 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 CCDC110Q8TBZ0 833 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 ZNF398Q8TD17 642 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 OR6C1Q96RD1 312 aa13.13□□□□□ -0.31
CTDSP1-212ENST00000494067 OSBPL8Q9BZF1 889 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms