RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 IL1RL2Q9HB29 575 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 ZFYVE1Q9HBF4 777 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 FBRSL1Q9HCM7 1045 aaKnown RBP13.61□□□□□ -0.23
VCP-207ENST00000493886 SARS2Q9NP81 518 aaKnown RBP13.61□□□□□ -0.23
VCP-207ENST00000493886 ASAH2Q9NR71 780 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 GIMAP2Q9UG22 337 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 C1orf232A0A0U1RR37 186 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 NCF1BA6NI72 391 aaPredicted RBP13.61□□□□□ -0.23
VCP-207ENST00000493886 IQCF5A8MTL0 148 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 NCF1CA8MVU1 366 aaPredicted RBP13.61□□□□□ -0.23
VCP-207ENST00000493886 PSMD12O00232 456 aaPredicted RBP13.61□□□□□ -0.23
VCP-207ENST00000493886 CCL16O15467 120 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 ZNF821O75541 412 aaPredicted RBP13.61□□□□□ -0.23
VCP-207ENST00000493886 IGSF6O95976 241 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 NCF1P14598 390 aaPredicted RBP13.61□□□□□ -0.23
VCP-207ENST00000493886 SOX11P35716 441 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 FOXA1P55317 472 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 MAPRE2Q15555 327 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 FAM151BQ6UXP7 276 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 MARVELD2Q8N4S9 558 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 TWIST2Q8WVJ9 160 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 LRTOMTQ8WZ04 291 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 MRPL1Q9BYD6 325 aaKnown RBP13.61□□□□□ -0.23
VCP-207ENST00000493886 IL23AQ9NPF7 189 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 DOCK6Q96HP0 2047 aa13.61□□□□□ -0.23
VCP-207ENST00000493886 STX16O14662 325 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 PRMT5O14744 637 aaPredicted RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 KLK8O60259 260 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 SOCS5O75159 536 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 RPS17P08708 135 aaKnown RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 HALP42357 657 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 PSMD7P51665 324 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 ARPC4P59998 168 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 HTRA4P83105 476 aaPredicted RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 LCP2Q13094 533 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 DGKKQ5KSL6 1271 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 KANK2Q63ZY3 851 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 UGT3A1Q6NUS8 523 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 CERS6Q6ZMG9 384 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 UBE2Q1Q7Z7E8 422 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 METTL3Q86U44 580 aaKnown RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 RPL10LQ96L21 214 aaKnown RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 Q9H521 79 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 ATP13A3Q9H7F0 1226 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 SEMA4BQ9NPR2 832 aaPredicted RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 SNX13Q9Y5W8 968 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 PTGDR2Q9Y5Y4 395 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 KIAA0100Q14667 2235 aaKnown RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 MKI67P46013 3256 aaKnown RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 ACOT8O14734 319 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 BCAS2O75934 225 aaPredicted RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 PRAMEF1O95521 474 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 CYBBP04839 570 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 CCR2P41597 374 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 CLCN7P51798 805 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 ZNF362Q5T0B9 420 aaPredicted RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 CMTM8Q8IZV2 173 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 PHF12Q96QT6 1004 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 KCNA7Q96RP8 456 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 AKTIPQ9H8T0 292 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 INIPQ9NRY2 104 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 PCDHB1Q9Y5F3 818 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 COMMD3-BMI1R4GMX3 469 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 GAPDHSO14556 408 aaPredicted RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 PIP5K1BO14986 540 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 CLDN7O95471 211 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 GLUD1P00367 558 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 HNF1BP35680 557 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 AGTR2P50052 363 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 STX5Q13190 355 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 SERPINA9Q86WD7 417 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 GPSM1Q86YR5 675 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 OR2AP1Q8NGE2 309 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
VCP-207ENST00000493886 ABHD8Q96I13 439 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 TCF25Q9BQ70 676 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 C1QTNF3Q9BXJ4 246 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 TRIM8Q9BZR9 551 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 HCFC1R1Q9NWW0 138 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 CCL26Q9Y258 94 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 PCDHGA7Q9Y5G6 932 aa13.6□□□□□ -0.23
VCP-207ENST00000493886 A0A1B0GTL3 188 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 PRSS51A0A1B0GVH4 220 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 ALDOCP09972 364 aaKnown RBP13.59□□□□□ -0.23
VCP-207ENST00000493886 PFKLP17858 780 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 ENDOUP21128 410 aaKnown RBP13.59□□□□□ -0.23
VCP-207ENST00000493886 RPL10P27635 214 aaKnown RBP13.59□□□□□ -0.23
VCP-207ENST00000493886 CTSOP43234 321 aaPredicted RBP13.59□□□□□ -0.23
VCP-207ENST00000493886 STK19P49842 368 aaPredicted RBP13.59□□□□□ -0.23
VCP-207ENST00000493886 ATP4BP51164 291 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 HK3P52790 923 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 LSAMPQ13449 338 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 CDKN3Q16667 212 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 MTX3Q5HYI7 312 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 REP15Q6BDI9 236 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 TXNDC11Q6PKC3 985 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 GRIN3AQ8TCU5 1115 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 NCSTNQ92542 709 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 LMLNQ96KR4 655 aa13.59□□□□□ -0.23
VCP-207ENST00000493886 ASB8Q9H765 288 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms