RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 GPR45Q9Y5Y3 372 aa20.81■□□□□ 0.92
CCDC88B-208ENST00000492980 TLL1O43897 1013 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 PEX2P28328 305 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 IRX1P78414 480 aaPredicted RBP20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 NTHL1P78549 312 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 IRGCQ6NXR0 463 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 ZFP1Q6P2D0 407 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 SCIMPQ6UWF3 145 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 RFLNAQ6ZTI6 216 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 GOLGA7Q7Z5G4 137 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 CDYL2Q8N8U2 506 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 DCBLD1Q8N8Z6 715 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 DLG3Q92796 817 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 ROPN1LQ96C74 230 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 CDK15Q96Q40 435 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 FAM126AQ9BYI3 521 aaPredicted RBP20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 NOL11Q9H8H0 719 aaKnown RBP20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 TMEM181Q9P2C4 612 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 ST14Q9Y5Y6 855 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 PIKFYVEQ9Y2I7 2098 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 C1SP09871 688 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 EPCAMP16422 314 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 CAPN3P20807 821 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 MRPL19P49406 292 aaKnown RBP20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 ATXN3P54252 364 aaPredicted RBP20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 DIO3P55073 304 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 LY6G5CQ5SRR4 150 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 LETMD1Q6P1Q0 360 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 ELMSAN1Q6PJG2 1045 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 PDSS2Q86YH6 399 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 PQLC1Q8N2U9 271 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 OR2T11Q8NH01 316 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 KLHL4Q9C0H6 718 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 VCX3BQ9H321 246 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 BRD9Q9H8M2 597 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 SPATS2LQ9NUQ6 558 aaKnown RBP20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 AIG1Q9NVV5 245 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 ELOVL2Q9NXB9 296 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 ZDHHC3Q9NYG2 299 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 C6orf203Q9P0P8 240 aaPredicted RBP20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 CD300AQ9UGN4 299 aa20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 PTBP2Q9UKA9 531 aaKnown RBP20.8■□□□□ 0.92
CCDC88B-208ENST00000492980 EIF4E1BA6NMX2 242 aaKnown RBP20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 OR7A17O14581 309 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 NSG1P42857 185 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 KLC1Q07866 573 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 RALGDSQ12967 914 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 TRIM25Q14258 630 aaKnown RBP20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 DMC1Q14565 340 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 TRIP10Q15642 601 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 LRRC36Q1X8D7 754 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 ATP13A5Q4VNC0 1218 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 PRSS36Q5K4E3 855 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 ADGRG2Q8IZP9 1017 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 ZNF557Q8N988 423 aaPredicted RBP20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 PCYOX1LQ8NBM8 494 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 MICAL1Q8TDZ2 1067 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 MYLIPQ8WY64 445 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 ZSWIM3Q96MP5 696 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 KLHL32Q96NJ5 620 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 NSUN3Q9H649 340 aaKnown RBP20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 TBC1D14Q9P2M4 693 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 NDUFAF1Q9Y375 327 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 HCFC2Q9Y5Z7 792 aa20.79■□□□□ 0.92
CCDC88B-208ENST00000492980 PRORSD1PA6NEY8 169 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 WASH3PC4AMC7 463 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 TAPBPO15533 448 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 HOXA9P31269 272 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 IRS1P35568 1242 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 GTF2H2Q13888 395 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 RPS6KA2Q15349 733 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 VPS26BQ4G0F5 336 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 LRRC73Q5JTD7 316 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 TMEM215Q68D42 235 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 GTF2H2CQ6P1K8 395 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 OR2A12Q8NGT7 310 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 UCMAQ8WVF2 138 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 CCT7Q99832 543 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 PFDN4Q9NQP4 134 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 LATS2Q9NRM7 1088 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 ZDHHC7Q9NXF8 308 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 MAP10Q9P2G4 905 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 B4GALT6Q9UBX8 382 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 WNT6Q9Y6F9 365 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 SOBPA7XYQ1 873 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 C9JVG2 144 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 GUCA1CO95843 209 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 B4GALNT1Q00973 533 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 PHKG1Q16816 387 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 SFT2D3Q587I9 215 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 GDPD4Q6W3E5 623 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 SPRED2Q7Z698 418 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 KIAA0907Q7Z7F0 614 aaPredicted RBP20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 LEMD2Q8NC56 503 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 PBXIP1Q96AQ6 731 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 GPATCH1Q9BRR8 931 aaKnown RBP20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 SLC39A3Q9BRY0 314 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 SLC52A3Q9NQ40 469 aa20.78■□□□□ 0.92
CCDC88B-208ENST00000492980 HSPA7P48741 367 aa20.77■□□□□ 0.92
CCDC88B-208ENST00000492980 SAMD4BQ5PRF9 694 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms