RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 COL4A6Q14031 1691 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 A0A1W2PRU2 124 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 DHRS12A0PJE2 317 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 OR7A17O14581 309 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 TEX28O15482 410 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 HOXA2O43364 376 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 SNUPNO95149 360 aaKnown RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 CLPTM1O96005 669 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 PENKP01210 267 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 FESP07332 822 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 SLC7A1P30825 629 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 RPL38P63173 70 aaKnown RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 LMAN2Q12907 356 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 BTG3Q14201 252 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 CHRNA6Q15825 494 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 CYP51A1Q16850 503 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 RFTN2Q52LD8 501 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 XKR7Q5GH72 579 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 ZBTB49Q6ZSB9 765 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 CMTM8Q8IZV2 173 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 ST13P5Q8NFI4 369 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 OR56A4Q8NGH8 313 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 PROKR1Q8TCW9 393 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 KCNJ9Q92806 393 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 PBXIP1Q96AQ6 731 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 ALG14Q96F25 216 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 CLPBQ9H078 707 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 P2RY12Q9H244 342 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 ALG2Q9H553 416 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 CAAP1Q9H8G2 361 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 ZFYVE1Q9HBF4 777 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 INTS6Q9UL03 887 aaKnown RBP12.28□□□□□ -0.44
HMGN1-220ENST00000492280 CCL26Q9Y258 94 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 ATP11BQ9Y2G3 1177 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 SLC4A7Q9Y6M7 1214 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 MYO9BQ13459 2157 aa12.28□□□□□ -0.44
HMGN1-220ENST00000492280 NPIPB15A6NHN6 443 aaPredicted RBP12.27□□□□□ -0.44
HMGN1-220ENST00000492280 CCDC154A6NI56 674 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 FZD6O60353 706 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 PGLSO95336 258 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 ACRP10323 421 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 UROSP10746 265 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 PCNAP12004 261 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 IDO1P14902 403 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 BPIP17213 487 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 PSMD8P48556 350 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 OR4D2P58180 307 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 PRKCQQ04759 706 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 LIPEQ05469 1076 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 RCAN2Q14206 197 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 POM121L1PQ3SYA9 428 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 DGKKQ5KSL6 1271 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 RNF168Q8IYW5 571 aaPredicted RBP12.27□□□□□ -0.44
HMGN1-220ENST00000492280 OFCC1Q8IZS5 231 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 TMEM125Q96AQ2 219 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 TMIGD2Q96BF3 282 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 ERLEC1Q96DZ1 483 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 PHF12Q96QT6 1004 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 ACTL8Q9H568 366 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 IPPKQ9H8X2 491 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 IL21Q9HBE4 155 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 LATS2Q9NRM7 1088 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 ZNHIT2Q9UHR6 403 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 RAB26Q9ULW5 256 aa12.27□□□□□ -0.44
HMGN1-220ENST00000492280 SCN8AQ9UQD0 1980 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 FFAR2O15552 330 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 SLC22A3O75751 556 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 FAM58BPP0C7Q3 252 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 HMGCLP35914 325 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 VEGFBP49765 207 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 ATP6AP1LQ52LC2 224 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 KLHDC10Q6PID8 442 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 CHERPQ8IWX8 916 aaKnown RBP12.27□□□□□ -0.45
HMGN1-220ENST00000492280 CMTR2Q8IYT2 770 aaKnown RBP12.27□□□□□ -0.45
HMGN1-220ENST00000492280 SLC22A15Q8IZD6 547 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 RIN3Q8TB24 985 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 SKA2Q8WVK7 121 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-220ENST00000492280 ROPN1LQ96C74 230 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 TCF12Q99081 682 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 ABCD2Q9UBJ2 740 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 CRLS1Q9UJA2 301 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 RIMKLBQ9ULI2 386 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 OAZ3Q9UMX2 235 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 BACE2Q9Y5Z0 518 aa12.27□□□□□ -0.45
HMGN1-220ENST00000492280 TAPBPO15533 448 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 AHCYL1O43865 530 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 EFEMP2O95967 443 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 CHEK2O96017 543 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 URODP06132 367 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 HOXB8P17481 243 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 ITGB8P26012 769 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 PTGER3P43115 390 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 ATP4BP51164 291 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 POLR2JP52435 117 aaKnown RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 CACNG1Q06432 222 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 BCL2L1Q07817 233 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 PPP1R8Q12972 351 aaKnown RBP12.26□□□□□ -0.45
HMGN1-220ENST00000492280 NFATC2Q13469 925 aa12.26□□□□□ -0.45
HMGN1-220ENST00000492280 GTF2H2Q13888 395 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms