RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 VPS41P49754 854 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 GEMP55040 296 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 GPLD1P80108 840 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 DR1Q01658 176 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 MPP3Q13368 585 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 BIRC2Q13490 618 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 TRIP13Q15645 432 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 PARP6Q2NL67 630 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 KIAA1614Q5VZ46 1190 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 CCDC70Q6NSX1 233 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 TTC27Q6P3X3 843 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 FAM151BQ6UXP7 276 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 CTAGE6Q86UF2 777 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 PHYKPLQ8IUZ5 450 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 CTAGE4Q8IX94 777 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 BMPERQ8N8U9 685 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 DTX3LQ8TDB6 740 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 BLOC1S5Q8TDH9 187 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 RTP4Q96DX8 246 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 CCNL2Q96S94 520 aaPredicted RBP12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 SRPK1Q96SB4 655 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 SLC38A3Q99624 504 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 FICDQ9BVA6 458 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 TBC1D10AQ9BXI6 508 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 FSD1LQ9BXM9 530 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 TRABDQ9H4I3 376 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 UGT1A7Q9HAW7 530 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 UGT1A10Q9HAW8 530 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 UGT1A8Q9HAW9 530 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 OCIAD1Q9NX40 245 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 OGFRQ9NZT2 677 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 ASIC3Q9UHC3 531 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 AAR2Q9Y312 384 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 KCTD3Q9Y597 815 aa12.49□□□□□ -0.41
SEC61A1-206ENST00000491668 KIR2DS5A0A0G2JLQ3 304 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 A0A0G2JNG1 304 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 KIR2DS3K7RE56 304 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 TK2O00142 265 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 KMOO15229 486 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 VEGFDO43915 354 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 ABCB7O75027 752 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 CDK14O94921 469 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 ZSCAN5DPP0CG00 497 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 LIPCP11150 499 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 ETS1P14921 441 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 HLA-DPA1P20036 260 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 FDFT1P37268 417 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 SLC19A1P41440 591 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 CTSCP53634 463 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 BASP1P80723 227 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 TMEM115Q12893 351 aaPredicted RBP12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 TRA2AQ13595 282 aaKnown RBP eCLIP12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 DHX34Q14147 1143 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 KIR2DS5Q14953 304 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 DENND5AQ6IQ26 1287 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 WDR74Q6RFH5 385 aaPredicted RBP12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 XKR5Q6UX68 686 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 MICALCLQ6ZW33 695 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 MAATS1Q7Z4T9 603 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 ARHGAP22Q7Z5H3 698 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 PRUNE1Q86TP1 453 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 VASH2Q86V25 355 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 LRRTM4Q86VH4 590 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 KLHDC8BQ8IXV7 354 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 RASGEF1AQ8N9B8 481 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 APOL2Q9BQE5 337 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 TIMM29Q9BSF4 260 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 SEMA4CQ9C0C4 833 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 B3GNT4Q9C0J1 378 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 OSGEPL1Q9H4B0 414 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 RAB6BQ9NRW1 208 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 HACD3Q9P035 362 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 PCYOX1Q9UHG3 505 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 DNAJC16Q9Y2G8 782 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 WDR37Q9Y2I8 494 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 PCDHGA3Q9Y5H0 932 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 B3GALT1Q9Y5Z6 326 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 ARL5AQ9Y689 179 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 SLC30A1Q9Y6M5 507 aa12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 ZNF106Q9H2Y7 1883 aaKnown RBP12.48□□□□□ -0.41
SEC61A1-206ENST00000491668 GLYATL1P3A0A0U1RQE8 302 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 PSMD3O43242 534 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 ZW10O43264 779 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 DUX1O43812 170 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 XRCC1P18887 633 aaPredicted RBP12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 RPL10P27635 214 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 RPL22P35268 128 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 SPAM1P38567 509 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 TERF1P54274 439 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 EPHA4P54764 986 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 DRG2P55039 364 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 GPS1Q13098 491 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 SEPT7Q16181 437 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 GPRC6AQ5T6X5 926 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 AGAP9Q5VTM2 703 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 ABRAXAS1Q6UWZ7 409 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 CCDC81Q6ZN84 652 aa12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 FAM83HQ6ZRV2 1179 aaPredicted RBP12.47□□□□□ -0.41
SEC61A1-206ENST00000491668 SYDE1Q6ZW31 735 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms