RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 MYL5Q02045 173 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 ZBTB17Q13105 803 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 NR6A1Q15406 480 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 ASIC2Q16515 512 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 PLEKHN1Q494U1 663 aaPredicted RBP12.94□□□□□ -0.34
USF1-206ENST00000491629 PLEKHS1Q5SXH7 462 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 C1QL3Q5VWW1 255 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 IZUMO3Q5VZ72 239 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 FBXO38Q6PIJ6 1188 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 FAM83HQ6ZRV2 1179 aaPredicted RBP12.94□□□□□ -0.34
USF1-206ENST00000491629 RBM12BQ8IXT5 1001 aaKnown RBP12.94□□□□□ -0.34
USF1-206ENST00000491629 D2HGDHQ8N465 521 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 SEC14L1Q92503 715 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 UBXN4Q92575 508 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 CXorf40BQ96DE9 158 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 SNRNP40Q96DI7 357 aaKnown RBP12.94□□□□□ -0.34
USF1-206ENST00000491629 MRPL47Q9HD33 250 aaKnown RBP12.94□□□□□ -0.34
USF1-206ENST00000491629 ZNF451Q9Y4E5 1061 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 AKAP9Q99996 3911 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 KCNK1O00180 336 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 ZNF185O15231 689 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 DDX3YO15523 660 aaKnown RBP12.93□□□□□ -0.34
USF1-206ENST00000491629 MYBL1P10243 752 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 IDSP22304 550 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 CA4P22748 312 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 RPS15P62841 145 aaKnown RBP12.93□□□□□ -0.34
USF1-206ENST00000491629 PIGHQ14442 188 aaPredicted RBP12.93□□□□□ -0.34
USF1-206ENST00000491629 KRT81Q14533 505 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 RPE65Q16518 533 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 ATP13A5Q4VNC0 1218 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 CCDC122Q5T0U0 273 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 CCDC183Q5T5S1 534 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 PDPK2PQ6A1A2 396 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 TIGD7Q6NT04 549 aaPredicted RBP12.93□□□□□ -0.34
USF1-206ENST00000491629 ZBTB2Q8N680 514 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 ENDOVQ8N8Q3 282 aaKnown RBP12.93□□□□□ -0.34
USF1-206ENST00000491629 MR1Q95460 341 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 PNPLA2Q96AD5 504 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 TADA1Q96BN2 335 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 FAF2Q96CS3 445 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 THAP2Q9H0W7 228 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 ASF1BQ9NVP2 202 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 PSMD13Q9UNM6 376 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 ZNF711Q9Y462 761 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 PCDHGB7Q9Y5F8 929 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 SPO11Q9Y5K1 396 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 ZFHX3Q15911 3703 aa12.93□□□□□ -0.34
USF1-206ENST00000491629 OR5K3A6NET4 321 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 A6NL46 340 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 GPR39O43194 453 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 VEGFDO43915 354 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 DPM1O60762 260 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 CPNE3O75131 537 aaKnown RBP12.92□□□□□ -0.34
USF1-206ENST00000491629 SCRG1O75711 98 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 TMEM63AO94886 807 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 LCA5LO95447 670 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 SLC4A1P02730 911 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 TNFRSF8P28908 595 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 HNRNPH3P31942 346 aaKnown RBP12.92□□□□□ -0.34
USF1-206ENST00000491629 RORAP35398 523 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 CTSCP53634 463 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 TUBB4BP68371 445 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 ACY1Q03154 408 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 TMEM115Q12893 351 aaPredicted RBP12.92□□□□□ -0.34
USF1-206ENST00000491629 ABRQ12979 859 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 RAPSNQ13702 412 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 TUBB2AQ13885 445 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 CRB2Q5IJ48 1285 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 HGSNATQ68CP4 663 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 FAM198BQ6UWH4 519 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 BPHLQ86WA6 291 aaPredicted RBP12.92□□□□□ -0.34
USF1-206ENST00000491629 DSELQ8IZU8 1212 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 GLIS1Q8NBF1 620 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 INPP5DQ92835 1189 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 SMAD5Q99717 465 aaKnown RBP12.92□□□□□ -0.34
USF1-206ENST00000491629 TUBB2BQ9BVA1 445 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 CEP41Q9BYV8 373 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 MAGEE1Q9HCI5 957 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 SLAMF7Q9NQ25 335 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 RTN4Q9NQC3 1192 aaKnown RBP12.92□□□□□ -0.34
USF1-206ENST00000491629 LMBRD1Q9NUN5 540 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 ANAPC7Q9UJX3 599 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 TCFL5Q9UL49 500 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 MYO7BQ6PIF6 2116 aa12.92□□□□□ -0.34
USF1-206ENST00000491629 HIVEP1P15822 2718 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 SSU72P8A0A1W2PR75 194 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 TLCD2A6NGC4 264 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 PRF1P14222 555 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 CDK11BP21127 795 aaKnown RBP12.91□□□□□ -0.34
USF1-206ENST00000491629 KPNA2P52292 529 aaKnown RBP12.91□□□□□ -0.34
USF1-206ENST00000491629 TAS2R40P59535 323 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 IFI35P80217 286 aaPredicted RBP12.91□□□□□ -0.34
USF1-206ENST00000491629 HSD11B2P80365 405 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 DMPKQ09013 629 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 KLHL30Q0D2K2 578 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 ZNF789Q5FWF6 425 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 DNTTIP2Q5QJE6 756 aaKnown RBP12.91□□□□□ -0.34
USF1-206ENST00000491629 CYB5D1Q6P9G0 228 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 KMT5CQ86Y97 462 aa12.91□□□□□ -0.34
USF1-206ENST00000491629 TRAPPC5Q8IUR0 188 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms