RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 PECAM1P16284 738 aaPredicted RBP8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 BPIP17213 487 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 VCLP18206 1134 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 LPOP22079 712 aaPredicted RBP8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 FECHP22830 423 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 PTPN4P29074 926 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 HMGCLP35914 325 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 MLLT10P55197 1068 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 DYNLT1P63172 113 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 ACY1Q03154 408 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 CDK18Q07002 472 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 KHDC1Q4VXA5 237 aaKnown RBP8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 C4orf17Q53FE4 359 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 ZNF648Q5T619 568 aaPredicted RBP8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 SLC9A4Q6AI14 798 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 PWWP2BQ6NUJ5 590 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 KLHL35Q6PF15 583 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 CRTC3Q6UUV7 619 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 H2AFVQ71UI9 128 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 SYVN1Q86TM6 617 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 TMEM135Q86UB9 458 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 HPS6Q86YV9 775 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 D2HGDHQ8N465 521 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 TC2NQ8N9U0 490 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 OR8K1Q8NGG5 319 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 OR8K5Q8NH50 307 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 BRSK1Q8TDC3 778 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 ZFPM2Q8WW38 1151 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 CTNNBL1Q8WYA6 563 aaPredicted RBP8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 RNF25Q96BH1 459 aaPredicted RBP8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 HAUS1Q96CS2 278 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 RNF31Q96EP0 1072 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 ZNF830Q96NB3 372 aaPredicted RBP8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 OLFM3Q96PB7 478 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 CD180Q99467 661 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 ACTL8Q9H568 366 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 C10orf88Q9H8K7 445 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 LRRC4CQ9HCJ2 640 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 LATS2Q9NRM7 1088 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 CUEDC1Q9NWM3 386 aaPredicted RBP8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 LNPEPQ9UIQ6 1025 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 RARRES3Q9UL19 164 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 ZNF711Q9Y462 761 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 MAP4K5Q9Y4K4 846 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 HEY1Q9Y5J3 304 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 ABCA12Q86UK0 2595 aa8.28□□□□□ -1.08
APOBEC3F-204ENST00000491387 IGHV5-51A0A0C4DH38 117 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 SSU72P8A0A1W2PR75 194 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 KLHL33A6NCF5 533 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 OR52A4PA6NMU1 304 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 AKR1B10O60218 316 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 VPS4BO75351 444 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 NDST3O95803 873 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 EPOP01588 193 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 SLC4A1P02730 911 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 KRT1P04264 644 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 FOLR1P15328 257 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 VARSP26640 1264 aaKnown RBP8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 RPL10P27635 214 aaKnown RBP8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 CA5AP35218 305 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 TUBB4BP68371 445 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 HSD11B2P80365 405 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 TMEM115Q12893 351 aaPredicted RBP8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 TUBB3Q13509 450 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 TUBB2AQ13885 445 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 PDK1Q15118 436 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 ATP13A5Q4VNC0 1218 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 ZFYVE27Q5T4F4 411 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 FHL5Q5TD97 284 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 IZUMO3Q5VZ72 239 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 ZDHHC20Q5W0Z9 365 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 ALS2CLQ60I27 953 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 IRGCQ6NXR0 463 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 AADACL2Q6P093 401 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 MFSD7Q6UXD7 560 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 NT5DC3Q86UY8 548 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 CCNYQ8ND76 341 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 SPATA22Q8NHS9 363 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 CPT1CQ8TCG5 803 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 ADAMTS17Q8TE56 1095 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 CXorf40BQ96DE9 158 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 ZNF514Q96K75 400 aaPredicted RBP8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 TUBB2BQ9BVA1 445 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 TRIM55Q9BYV6 548 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 GPR63Q9BZJ6 419 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 RBSNQ9H1K0 784 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 DEF6Q9H4E7 631 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 TRABDQ9H4I3 376 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 AKIRIN1Q9H9L7 192 aaPredicted RBP8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 PLEKHB1Q9UF11 243 aaPredicted RBP8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 VPS4AQ9UN37 437 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 SHOC2Q9UQ13 582 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 FARSAQ9Y285 508 aaKnown RBP8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 DNAJC16Q9Y2G8 782 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 WDR37Q9Y2I8 494 aa8.27□□□□□ -1.09
APOBEC3F-204ENST00000491387 LOC285095A0A1B0GVY8 99 aa8.26□□□□□ -1.09
APOBEC3F-204ENST00000491387 TLCD2A6NGC4 264 aa8.26□□□□□ -1.09
APOBEC3F-204ENST00000491387 TTLL8A6PVC2 850 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms