RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 KIF5AQ12840 1032 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 SPARCL1Q14515 664 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 LINC00303Q3SY05 128 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 AMZ2Q86W34 360 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 PIAS4Q8N2W9 510 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-219ENST00000491183 SPC24Q8NBT2 197 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 RTP4Q96DX8 246 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 C9orf72Q96LT7 481 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 CTRCQ99895 268 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 APMAPQ9HDC9 416 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 FBXO8Q9NRD0 319 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 IMPACTQ9P2X3 320 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 FKBPLQ9UIM3 349 aa17.67■□□□□ 0.42
HMGN1-219ENST00000491183 DNMT3AQ9Y6K1 912 aaPredicted RBP17.67■□□□□ 0.42
HMGN1-219ENST00000491183 SRP72O76094 671 aaKnown RBP17.66■□□□□ 0.42
HMGN1-219ENST00000491183 STK10O94804 968 aaKnown RBP17.66■□□□□ 0.42
HMGN1-219ENST00000491183 PRAMEF1O95521 474 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 AMD1P17707 334 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 KLF1Q13351 362 aaPredicted RBP17.66■□□□□ 0.42
HMGN1-219ENST00000491183 GPR18Q14330 331 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 NFE2L1Q14494 772 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 BEND7Q8N7W2 519 aaPredicted RBP17.66■□□□□ 0.42
HMGN1-219ENST00000491183 EXD3Q8N9H8 876 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 OR13C4Q8NGS5 318 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 NAT14Q8WUY8 206 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 RSC1A1Q92681 617 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 CXorf40BQ96DE9 158 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 ZCCHC2Q9C0B9 1178 aaKnown RBP17.66■□□□□ 0.42
HMGN1-219ENST00000491183 ASB8Q9H765 288 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 ARNT2Q9HBZ2 717 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 PILRAQ9UKJ1 303 aa17.66■□□□□ 0.42
HMGN1-219ENST00000491183 R3HDM2Q9Y2K5 976 aaKnown RBP17.66■□□□□ 0.42
HMGN1-219ENST00000491183 KALRNO60229 2985 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 TCRBV7S2A1N4TA0A589 114 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 AGAP14A8MT82 685 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 MIF4GDA9UHW6 222 aaKnown RBP17.65■□□□□ 0.42
HMGN1-219ENST00000491183 CAPN5O15484 640 aaPredicted RBP17.65■□□□□ 0.42
HMGN1-219ENST00000491183 RAD1O60671 282 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 METTL18O95568 372 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 ANKRD34CP0C6C1 535 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 MSH3P20585 1137 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 CDC25BP30305 580 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 LEPRP48357 1165 aaKnown RBP17.65■□□□□ 0.42
HMGN1-219ENST00000491183 ATP1A2P50993 1020 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 CYP4F2P78329 520 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 RPE65Q16518 533 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 FNBP1LQ5T0N5 605 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 KCTD11Q693B1 232 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 XKR5Q6UX68 686 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 MICALCLQ6ZW33 695 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 DET1Q7L5Y6 550 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 TIPARPQ7Z3E1 657 aaKnown RBP17.65■□□□□ 0.42
HMGN1-219ENST00000491183 CACNA2D3Q8IZS8 1091 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 SYCE1Q8N0S2 351 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 UBL4BQ8N7F7 174 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 FAM71DQ8N9W8 422 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 GPR150Q8NGU9 434 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 TGM7Q96PF1 710 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 TEFMQ96QE5 360 aaKnown RBP17.65■□□□□ 0.42
HMGN1-219ENST00000491183 TBL1YQ9BQ87 522 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 SIDT1Q9NXL6 827 aaKnown RBP17.65■□□□□ 0.42
HMGN1-219ENST00000491183 PSMD13Q9UNM6 376 aa17.65■□□□□ 0.42
HMGN1-219ENST00000491183 SGTAO43765 313 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 KIF1CO43896 1103 aaKnown RBP17.64■□□□□ 0.41
HMGN1-219ENST00000491183 CRTAMO95727 393 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 HALP42357 657 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 ZNF140P52738 457 aaPredicted RBP17.64■□□□□ 0.41
HMGN1-219ENST00000491183 TMPRSS15P98073 1019 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 PARP6Q2NL67 630 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 METRNLQ641Q3 311 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 CEACAM20Q6UY09 585 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 RBM12BQ8IXT5 1001 aaKnown RBP17.64■□□□□ 0.41
HMGN1-219ENST00000491183 IL22RA1Q8N6P7 574 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 TTC13Q8NBP0 860 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 SLC35B2Q8TB61 432 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 EXTL1Q92935 676 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 MED8Q96G25 268 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 HES6Q96HZ4 224 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 SLC12A9Q9BXP2 914 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 CAPN6Q9Y6Q1 641 aa17.64■□□□□ 0.41
HMGN1-219ENST00000491183 GOLGA6L9A6NEM1 432 aa17.63■□□□□ 0.41
HMGN1-219ENST00000491183 LDB2O43679 373 aa17.63■□□□□ 0.41
HMGN1-219ENST00000491183 LIFP15018 202 aa17.63■□□□□ 0.41
HMGN1-219ENST00000491183 PBLDP30039 288 aaPredicted RBP17.63■□□□□ 0.41
HMGN1-219ENST00000491183 AKT1P31749 480 aa17.63■□□□□ 0.41
HMGN1-219ENST00000491183 GDF10P55107 478 aa17.63■□□□□ 0.41
HMGN1-219ENST00000491183 LONRF2Q1L5Z9 754 aa17.63■□□□□ 0.41
HMGN1-219ENST00000491183 ZSCAN1Q8NBB4 408 aa17.63■□□□□ 0.41
HMGN1-219ENST00000491183 ZNF514Q96K75 400 aaPredicted RBP17.63■□□□□ 0.41
HMGN1-219ENST00000491183 PPP1R2P1Q96PQ5 205 aa17.63■□□□□ 0.41
HMGN1-219ENST00000491183 INSM2Q96T92 566 aaPredicted RBP17.63■□□□□ 0.41
HMGN1-219ENST00000491183 ZPBPQ9BS86 351 aa17.63■□□□□ 0.41
HMGN1-219ENST00000491183 FAM96AQ9H5X1 160 aa17.63■□□□□ 0.41
HMGN1-219ENST00000491183 EPHA6Q9UF33 1036 aa17.63■□□□□ 0.41
HMGN1-219ENST00000491183 TMEM184BQ9Y519 407 aaPredicted RBP17.63■□□□□ 0.41
HMGN1-219ENST00000491183 COL6A6A6NMZ7 2263 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 MGAT4DA6NG13 374 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 CCL22O00626 93 aa17.62■□□□□ 0.41
HMGN1-219ENST00000491183 POLR1CO15160 346 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-219ENST00000491183 TOX3O15405 576 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms