RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 HNRNPKP61978 463 aaKnown RBP eCLIP10.79□□□□□ -0.68
VARS2-210ENST00000490699 BOP1Q14137 746 aaKnown RBP10.79□□□□□ -0.68
VARS2-210ENST00000490699 LPAL2Q16609 132 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 HSP90B2PQ58FF3 399 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 MROH9Q5TGP6 573 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 HECTD2Q5U5R9 776 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 ADGRD1Q6QNK2 874 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 TBC1D1Q86TI0 1168 aaPredicted RBP10.79□□□□□ -0.68
VARS2-210ENST00000490699 PELI3Q8N2H9 469 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 CLDN19Q8N6F1 224 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 BEND7Q8N7W2 519 aaPredicted RBP10.79□□□□□ -0.68
VARS2-210ENST00000490699 RASGEF1AQ8N9B8 481 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 HM13Q8TCT9 377 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 EPS8L3Q8TE67 593 aaKnown RBP10.79□□□□□ -0.68
VARS2-210ENST00000490699 SKA2Q8WVK7 121 aaPredicted RBP10.79□□□□□ -0.68
VARS2-210ENST00000490699 ASZ1Q8WWH4 475 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 ZIM3Q96PE6 472 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 NDNQ99608 321 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 GPR22Q99680 433 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 ORAI3Q9BRQ5 295 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 TIMM29Q9BSF4 260 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 TMEM109Q9BVC6 243 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 GSDMCQ9BYG8 508 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 P2RY12Q9H244 342 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 EPB41L4BQ9H329 900 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 OSGEPL1Q9H4B0 414 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 POPDC3Q9HBV1 291 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 SYTL2Q9HCH5 934 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 SMYD2Q9NRG4 433 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 SENP1Q9P0U3 644 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 APOBEC3BQ9UH17 382 aaKnown RBP10.79□□□□□ -0.68
VARS2-210ENST00000490699 TMPRSS11EQ9UL52 423 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 SUFUQ9UMX1 484 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 SLC6A14Q9UN76 642 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 VWA7Q9Y334 891 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 PSAT1Q9Y617 370 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 OAS3Q9Y6K5 1087 aaKnown RBP10.79□□□□□ -0.68
VARS2-210ENST00000490699 SPAG17Q6Q759 2223 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 PLXNB3Q9ULL4 1909 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 VCANP13611 3396 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 C17orf113A0A1B0GUU1 675 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 A0A1W2PR77 199 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 MGAT4DA6NG13 374 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 TMEM202A6NGA9 273 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 TRIM49D1C9J1S8 452 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 LIN7AO14910 233 aaPredicted RBP10.78□□□□□ -0.68
VARS2-210ENST00000490699 KHNYNO15037 678 aaKnown RBP10.78□□□□□ -0.68
VARS2-210ENST00000490699 CHUKO15111 745 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 ATP8B1O43520 1251 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 CER1O95813 267 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 MT-ND3P03897 115 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 MPOP05164 745 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 CEACAM5P06731 702 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 SLC2A4P14672 509 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 JUNDP17535 347 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 ITGB6P18564 788 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 DGKAP23743 735 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 MPLP40238 635 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 HALP42357 657 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 HK3P52790 923 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 RAB10P61026 200 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 ELOCQ15369 112 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 ZNF648Q5T619 568 aaPredicted RBP10.78□□□□□ -0.68
VARS2-210ENST00000490699 PEAR1Q5VY43 1037 aaPredicted RBP10.78□□□□□ -0.68
VARS2-210ENST00000490699 KLC3Q6P597 504 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 CHST15Q7LFX5 561 aaPredicted RBP10.78□□□□□ -0.68
VARS2-210ENST00000490699 PHACTR4Q8IZ21 702 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 IQCKQ8N0W5 287 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 FSTL5Q8N475 847 aaPredicted RBP10.78□□□□□ -0.68
VARS2-210ENST00000490699 ZBTB2Q8N680 514 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 OR2W6PQ8NHA6 318 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 DCAKDQ8WVC6 231 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 ANKRD7Q92527 254 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 INPP5DQ92835 1189 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 TSACCQ96A04 125 aaPredicted RBP10.78□□□□□ -0.68
VARS2-210ENST00000490699 LINC00615Q96LM1 132 aaPredicted RBP10.78□□□□□ -0.68
VARS2-210ENST00000490699 FOPNLQ96NB1 174 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 IQCGQ9H095 443 aaKnown RBP10.78□□□□□ -0.68
VARS2-210ENST00000490699 ERVMER34-1Q9H9K5 563 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 GPAMQ9HCL2 828 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 FGF22Q9HCT0 170 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 TRNAU1APQ9NX07 287 aaKnown RBP10.78□□□□□ -0.68
VARS2-210ENST00000490699 KLHL42Q9P2K6 505 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 NCDNQ9UBB6 729 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 SPASTQ9UBP0 616 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 FAM8A1Q9UBU6 413 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 ANKRD6Q9Y2G4 727 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 DGKBQ9Y6T7 804 aa10.78□□□□□ -0.68
VARS2-210ENST00000490699 DOCK9Q9BZ29 2069 aa10.77□□□□□ -0.69
VARS2-210ENST00000490699 A0A087X1B8 175 aa10.77□□□□□ -0.69
VARS2-210ENST00000490699 A0A1B0GVT2 93 aa10.77□□□□□ -0.69
VARS2-210ENST00000490699 NEMP2A6NFY4 417 aa10.77□□□□□ -0.69
VARS2-210ENST00000490699 EIF3FO00303 357 aaPredicted RBP10.77□□□□□ -0.69
VARS2-210ENST00000490699 IFRD1O00458 451 aaPredicted RBP10.77□□□□□ -0.69
VARS2-210ENST00000490699 FOXD2O60548 495 aaPredicted RBP10.77□□□□□ -0.69
VARS2-210ENST00000490699 NIPSNAP2O75323 286 aa10.77□□□□□ -0.69
VARS2-210ENST00000490699 POP7O75817 140 aaKnown RBP10.77□□□□□ -0.69
VARS2-210ENST00000490699 FAM155BO75949 473 aa10.77□□□□□ -0.69
VARS2-210ENST00000490699 RPN2P04844 631 aa10.77□□□□□ -0.69
VARS2-210ENST00000490699 RETP07949 1114 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms