RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 C11orf96Q7Z7L8 435 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 RHOT1Q8IXI2 618 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 CARFQ8N187 725 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 D2HGDHQ8N465 521 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 TRAM1L1Q8N609 369 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 RBMXL3Q8N7X1 1067 aaKnown RBP8.03□□□□□ -1.12
USP39-216ENST00000490193 GLIS1Q8NBF1 620 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 GPR26Q8NDV2 337 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 ANKRD20A12PQ8NF67 263 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 OR8K5Q8NH50 307 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 ZNF653Q96CK0 615 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 CXorf40BQ96DE9 158 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 SMAD5Q99717 465 aaKnown RBP8.03□□□□□ -1.12
USP39-216ENST00000490193 NUP85Q9BW27 656 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 SPATA16Q9BXB7 569 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 ADGRE3Q9BY15 652 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 ISCUQ9H1K1 167 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 SLAMF7Q9NQ25 335 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 RAD18Q9NS91 495 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 FGF21Q9NSA1 209 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 RBM22Q9NW64 420 aaKnown RBP eCLIP8.03□□□□□ -1.12
USP39-216ENST00000490193 DTLQ9NZJ0 730 aa8.03□□□□□ -1.12
USP39-216ENST00000490193 PCSK5Q92824 1860 aa8.02□□□□□ -1.12
USP39-216ENST00000490193 PCM1Q15154 2024 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 TLCD2A6NGC4 264 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 DDX3XO00571 662 aaKnown RBP eCLIP8.02□□□□□ -1.13
USP39-216ENST00000490193 KCNJ13O60928 360 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 TMEM63AO94886 807 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 CBX6O95503 412 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 HLA-DQB2P05538 268 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 EBLN1P0CF75 366 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 RPL10P27635 214 aaKnown RBP8.02□□□□□ -1.13
USP39-216ENST00000490193 PRKCIP41743 596 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 ARSEP51690 589 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 GSDMDP57764 484 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 TUBB4BP68371 445 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 PDE1BQ01064 536 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 DMPKQ09013 629 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 GPS2Q13227 327 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 TUBB2AQ13885 445 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 KCNAB1Q14722 419 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 SEPT7Q16181 437 aaKnown RBP8.02□□□□□ -1.13
USP39-216ENST00000490193 PLA2G4EQ3MJ16 856 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 ZRANB3Q5FWF4 1079 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 CCDC183Q5T5S1 534 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 ZNF648Q5T619 568 aaPredicted RBP8.02□□□□□ -1.13
USP39-216ENST00000490193 C1QL3Q5VWW1 255 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 KLHL35Q6PF15 583 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 MED25Q71SY5 747 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 ZNF571Q7Z3V5 609 aaPredicted RBP8.02□□□□□ -1.13
USP39-216ENST00000490193 TMC3Q7Z5M5 1100 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 SLC34A3Q8N130 599 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 TMEM102Q8N9M5 508 aaPredicted RBP8.02□□□□□ -1.13
USP39-216ENST00000490193 FDCSPQ8NFU4 85 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 PRR7Q8TB68 274 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 ZNF501Q96CX3 271 aaPredicted RBP8.02□□□□□ -1.13
USP39-216ENST00000490193 VPS35Q96QK1 796 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 TRIB3Q96RU7 358 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 TUBB2BQ9BVA1 445 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 NUDT9Q9BW91 350 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 XPO4Q9C0E2 1151 aaKnown RBP8.02□□□□□ -1.13
USP39-216ENST00000490193 ZFYVE1Q9HBF4 777 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 MAGEE1Q9HCI5 957 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 ARFGAP3Q9NP61 516 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 AIPL1Q9NZN9 384 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 C5AR2Q9P296 337 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 G3BP2Q9UN86 482 aaKnown RBP8.02□□□□□ -1.13
USP39-216ENST00000490193 SLC5A6Q9Y289 635 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 DNAJC16Q9Y2G8 782 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 WDR37Q9Y2I8 494 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 POLEQ07864 2286 aa8.02□□□□□ -1.13
USP39-216ENST00000490193 NUP210LQ5VU65 1888 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 OR5K3A6NET4 321 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 LRRC53A6NM62 1247 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 SCRG1O75711 98 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 CDK14O94921 469 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 CAPN1P07384 714 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 CD48P09326 243 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 VCLP18206 1134 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 ELAVL4P26378 380 aaKnown RBP8.01□□□□□ -1.13
USP39-216ENST00000490193 RORAP35398 523 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 CD86P42081 329 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 HALP42357 657 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 VAV2P52735 878 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 DRG2P55039 364 aaKnown RBP8.01□□□□□ -1.13
USP39-216ENST00000490193 RRADP55042 308 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 HSD11B2P80365 405 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 MYL5Q02045 173 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 DPYSL3Q14195 570 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 KRT81Q14533 505 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 KHDC1Q4VXA5 237 aaKnown RBP8.01□□□□□ -1.13
USP39-216ENST00000490193 CCDC122Q5T0U0 273 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 RBM43Q6ZSC3 357 aaKnown RBP8.01□□□□□ -1.13
USP39-216ENST00000490193 DSELQ8IZU8 1212 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 IQCKQ8N0W5 287 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.01□□□□□ -1.13
USP39-216ENST00000490193 SLC38A9Q8NBW4 561 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 GPR150Q8NGU9 434 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 MR1Q95460 341 aa8.01□□□□□ -1.13
USP39-216ENST00000490193 FAF2Q96CS3 445 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms