RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 ZNF517Q6ZMY9 492 aaPredicted RBP13.66□□□□□ -0.22
VARS-227ENST00000489979 KMT5CQ86Y97 462 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 D2HGDHQ8N465 521 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 TTC30BQ8N4P2 665 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 ENDOVQ8N8Q3 282 aaKnown RBP13.66□□□□□ -0.22
VARS-227ENST00000489979 SLC38A9Q8NBW4 561 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 CCNYQ8ND76 341 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 TRIB3Q96RU7 358 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 GPR63Q9BZJ6 419 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 MAGEE1Q9HCI5 957 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 KCND1Q9NSA2 647 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 ANAPC7Q9UJX3 599 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 TMPRSS11EQ9UL52 423 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 G3BP2Q9UN86 482 aaKnown RBP13.66□□□□□ -0.22
VARS-227ENST00000489979 SNX7Q9UNH6 387 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 ZNF711Q9Y462 761 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 SEC16AO15027 2179 aa13.66□□□□□ -0.22
VARS-227ENST00000489979 PIKFYVEQ9Y2I7 2098 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 SSU72P8A0A1W2PR75 194 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 TLCD2A6NGC4 264 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 KCNK1O00180 336 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 MX2P20592 715 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 ITGA1P56199 1179 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 TUBB4BP68371 445 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 HSD11B2P80365 405 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 TMEM115Q12893 351 aaPredicted RBP13.65□□□□□ -0.22
VARS-227ENST00000489979 SLC10A2Q12908 348 aaPredicted RBP13.65□□□□□ -0.22
VARS-227ENST00000489979 TUBB2AQ13885 445 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 GTF2H3Q13889 308 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 PLCL1Q15111 1095 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 RPE65Q16518 533 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 HADHQ16836 314 aaKnown RBP13.65□□□□□ -0.22
VARS-227ENST00000489979 PRAMEF17Q5VTA0 474 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 HPS6Q86YV9 775 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 TICAM1Q8IUC6 712 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 CNTD1Q8N815 330 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 KCTD6Q8NC69 237 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 HDAC11Q96DB2 347 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 CD180Q99467 661 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 TUBB2BQ9BVA1 445 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 THAP2Q9H0W7 228 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 ANO10Q9NW15 660 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 PSMD13Q9UNM6 376 aa13.65□□□□□ -0.22
VARS-227ENST00000489979 OR5K3A6NET4 321 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 CBX6O95503 412 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 KLK3P07288 261 aaPredicted RBP13.64□□□□□ -0.23
VARS-227ENST00000489979 RAB40ALP0C0E4 278 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 VAV2P52735 878 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 GSDMDP57764 484 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 ZBTB17Q13105 803 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 RAPSNQ13702 412 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 PCSK7Q16549 785 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 ATP13A5Q4VNC0 1218 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 PLEKHS1Q5SXH7 462 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 SASS6Q6UVJ0 657 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 RBM43Q6ZSC3 357 aaKnown RBP13.64□□□□□ -0.23
VARS-227ENST00000489979 AMZ2Q86W34 360 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 CPNE8Q86YQ8 564 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 DSELQ8IZU8 1212 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 ZBTB2Q8N680 514 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 PQLC3Q8N755 202 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 GDAP1Q8TB36 358 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 ZNF501Q96CX3 271 aaPredicted RBP13.64□□□□□ -0.23
VARS-227ENST00000489979 SNRNP40Q96DI7 357 aaKnown RBP13.64□□□□□ -0.23
VARS-227ENST00000489979 C5orf34Q96MH7 638 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 VPS35Q96QK1 796 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 ZNF670Q9BS34 389 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 BPIFA1Q9NP55 256 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 HRASLS2Q9NWW9 162 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 GPR83Q9NYM4 423 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 CHMP5Q9NZZ3 219 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 TCFL5Q9UL49 500 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 SLC5A6Q9Y289 635 aa13.64□□□□□ -0.23
VARS-227ENST00000489979 MYO1FO00160 1098 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 MEN1O00255 615 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 AURKAO14965 403 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 KCNJ13O60928 360 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 POP7O75817 140 aaKnown RBP13.63□□□□□ -0.23
VARS-227ENST00000489979 TNFRSF8P28908 595 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 IFI35P80217 286 aaPredicted RBP13.63□□□□□ -0.23
VARS-227ENST00000489979 PLEKHN1Q494U1 663 aaPredicted RBP13.63□□□□□ -0.23
VARS-227ENST00000489979 TMTC4Q5T4D3 741 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 C1QL3Q5VWW1 255 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 FBXO38Q6PIJ6 1188 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 FAM83HQ6ZRV2 1179 aaPredicted RBP13.63□□□□□ -0.23
VARS-227ENST00000489979 SRRM1Q8IYB3 904 aaKnown RBP13.63□□□□□ -0.23
VARS-227ENST00000489979 CISD2Q8N5K1 135 aaKnown RBP13.63□□□□□ -0.23
VARS-227ENST00000489979 TMEM102Q8N9M5 508 aaPredicted RBP13.63□□□□□ -0.23
VARS-227ENST00000489979 GLIS1Q8NBF1 620 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 OR8K5Q8NH50 307 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 FAF2Q96CS3 445 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 LRFN5Q96NI6 719 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 SMAD5Q99717 465 aaKnown RBP13.63□□□□□ -0.23
VARS-227ENST00000489979 NLNQ9BYT8 704 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 CEP41Q9BYV8 373 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 RTN4Q9NQC3 1192 aaKnown RBP13.63□□□□□ -0.23
VARS-227ENST00000489979 LATS2Q9NRM7 1088 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 ASF1BQ9NVP2 202 aa13.63□□□□□ -0.23
VARS-227ENST00000489979 CFAP20Q9Y6A4 193 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms