RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 FTCDO95954 541 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 F8A1P23610 371 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 CDKN1CP49918 316 aaPredicted RBP11.59□□□□□ -0.55
SRSF4-204ENST00000489898 EIF3EP60228 445 aaKnown RBP11.59□□□□□ -0.55
SRSF4-204ENST00000489898 SH3BP2P78314 561 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 INSCQ1MX18 579 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 BCL7AQ4VC05 210 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 BZW1Q7L1Q6 419 aaKnown RBP11.59□□□□□ -0.55
SRSF4-204ENST00000489898 PID1Q7Z2X4 250 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 SLC9B2Q86UD5 537 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 CDKL3Q8IVW4 592 aaPredicted RBP11.59□□□□□ -0.55
SRSF4-204ENST00000489898 GLIS1Q8NBF1 620 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 OR4K2Q8NGD2 314 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 OR10G6Q8NH81 332 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 JPH3Q8WXH2 748 aaPredicted RBP11.59□□□□□ -0.55
SRSF4-204ENST00000489898 SGF29Q96ES7 293 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 LINC00615Q96LM1 132 aaPredicted RBP11.59□□□□□ -0.55
SRSF4-204ENST00000489898 C9orf72Q96LT7 481 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 SRPK1Q96SB4 655 aaKnown RBP11.59□□□□□ -0.55
SRSF4-204ENST00000489898 CTRCQ99895 268 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 C19orf43Q9BQ61 176 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 RAB33BQ9H082 229 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 OSGEPL1Q9H4B0 414 aa11.59□□□□□ -0.55
SRSF4-204ENST00000489898 ZNF768Q9H5H4 540 aaKnown RBP11.59□□□□□ -0.55
SRSF4-204ENST00000489898 LOC101059948A0A1B0GTJ6 334 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 C5orf60A6NFR6 353 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 OR2AG2A6NM03 316 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 OR5K4A6NMS3 321 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 H7C0S8 307 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 KCNN4O15554 427 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 PRLHRP49683 370 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 GEMP55040 296 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 RWDD2BP57060 319 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 SPARCL1Q14515 664 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 SPA17Q15506 151 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 TAF1AQ15573 450 aaPredicted RBP11.58□□□□□ -0.56
SRSF4-204ENST00000489898 CERS6Q6ZMG9 384 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 TRAPPC5Q8IUR0 188 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 PIANPQ8IYJ0 282 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 SPDYE1Q8NFV5 336 aaPredicted RBP11.58□□□□□ -0.56
SRSF4-204ENST00000489898 ATG4AQ8WYN0 398 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 KLHL6Q8WZ60 621 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 EXTL1Q92935 676 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 RNF31Q96EP0 1072 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 BAG1Q99933 345 aaPredicted RBP11.58□□□□□ -0.56
SRSF4-204ENST00000489898 EPB41L1Q9H4G0 881 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 FBXO8Q9NRD0 319 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 EPHA6Q9UF33 1036 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 MAST4O15021 2626 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 SHANK1Q9Y566 2161 aa11.58□□□□□ -0.56
SRSF4-204ENST00000489898 ANKRD12Q6UB98 2062 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 MACROD2A1Z1Q3 448 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 A8MU76 341 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 H7C0C1 242 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 RAD1O60671 282 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 PPFIA2O75334 1257 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 SRP72O76094 671 aaKnown RBP11.57□□□□□ -0.56
SRSF4-204ENST00000489898 UBXN7O94888 489 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 TYRP1P17643 537 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 ATP5OP48047 213 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 RPE65Q16518 533 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 TBR1Q16650 682 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 LDLRAP1Q5SW96 308 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 METRNLQ641Q3 311 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 NXPE1Q8N323 547 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 NCSTNQ92542 709 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 MED8Q96G25 268 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 SLC41A2Q96JW4 573 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 DNAJC1Q96KC8 554 aaKnown RBP11.57□□□□□ -0.56
SRSF4-204ENST00000489898 PPM1MQ96MI6 270 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 FSD1LQ9BXM9 530 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 STARD5Q9NSY2 213 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 SLC39A1Q9NY26 324 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 IL17BQ9UHF5 180 aa11.57□□□□□ -0.56
SRSF4-204ENST00000489898 HEATR5BQ9P2D3 2071 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 NBASA2RRP1 2371 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 IGHV5-51A0A0C4DH38 117 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 MROH6A6NGR9 719 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 PDZK1P1A8MUH7 402 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 CAPN5O15484 640 aaPredicted RBP11.56□□□□□ -0.56
SRSF4-204ENST00000489898 POP7O75817 140 aaKnown RBP11.56□□□□□ -0.56
SRSF4-204ENST00000489898 ANXA9O76027 345 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 ITGB2P05107 769 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 FAM87AP0C7U9 286 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 MTHFD1P11586 935 aaKnown RBP11.56□□□□□ -0.56
SRSF4-204ENST00000489898 SLC2A4P14672 509 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 LPOP22079 712 aaPredicted RBP11.56□□□□□ -0.56
SRSF4-204ENST00000489898 OAS2P29728 719 aaKnown RBP11.56□□□□□ -0.56
SRSF4-204ENST00000489898 CSTF2P33240 577 aaKnown RBP eCLIP11.56□□□□□ -0.56
SRSF4-204ENST00000489898 STAT5AP42229 794 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 MAPK9P45984 424 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 RAB15P59190 212 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 ITGA9Q13797 1035 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 KCTD19Q17RG1 926 aaPredicted RBP11.56□□□□□ -0.56
SRSF4-204ENST00000489898 SNAP47Q5SQN1 464 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 ITPRIPL1Q6GPH6 555 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 CAPRIN2Q6IMN6 1127 aaKnown RBP11.56□□□□□ -0.56
SRSF4-204ENST00000489898 TMEM220Q6QAJ8 160 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 PRUNE1Q86TP1 453 aa11.56□□□□□ -0.56
SRSF4-204ENST00000489898 FAM129CQ86XR2 697 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms