RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 GRK7Q8WTQ7 553 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 MS4A14Q96JA4 679 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 SLC46A1Q96NT5 459 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 NUDT22Q9BRQ3 303 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 AP1M1Q9BXS5 423 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 UCK1Q9HA47 277 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 POT1Q9NUX5 634 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 BFARQ9NZS9 450 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 ACSL5Q9ULC5 683 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 RIMKLBQ9ULI2 386 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 LOXL2Q9Y4K0 774 aa14.03□□□□□ -0.16
BRCA1-218ENST00000489037 LILRA5A6NI73 299 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 KRT14P02533 472 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 AMD1P17707 334 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 TCP1P17987 556 aaKnown RBP14.02□□□□□ -0.17
BRCA1-218ENST00000489037 ACRV1P26436 265 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 CA5AP35218 305 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 SLC19A1P41440 591 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 LIMK2P53671 638 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 SESN2P58004 480 aaPredicted RBP14.02□□□□□ -0.17
BRCA1-218ENST00000489037 UBE2IP63279 158 aaKnown RBP14.02□□□□□ -0.17
BRCA1-218ENST00000489037 PRAMEP78395 509 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 GSE1Q14687 1217 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 TRIP13Q15645 432 aaPredicted RBP14.02□□□□□ -0.17
BRCA1-218ENST00000489037 PCID2Q5JVF3 399 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 TSTD2Q5T7W7 516 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 CCDC137Q6PK04 289 aaKnown RBP14.02□□□□□ -0.17
BRCA1-218ENST00000489037 TMEM26Q6ZUK4 368 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 JAMLQ86YT9 394 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 SLITRK4Q8IW52 837 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 ZNF248Q8NDW4 579 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 OR6P1Q8NGX9 317 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 OR2L2Q8NH16 312 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 SNIP1Q8TAD8 396 aaKnown RBP14.02□□□□□ -0.17
BRCA1-218ENST00000489037 ACTRT1Q8TDG2 376 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 NCSTNQ92542 709 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 PEX13Q92968 403 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 CCDC97Q96F63 343 aaPredicted RBP14.02□□□□□ -0.17
BRCA1-218ENST00000489037 SEMA6CQ9H3T2 930 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 SCHIP1Q9P0W5 487 aaPredicted RBP14.02□□□□□ -0.17
BRCA1-218ENST00000489037 PISDQ9UG56 409 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 ANAPC5Q9UJX4 755 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 SNX12Q9UMY4 172 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 TCAF1Q9Y4C2 921 aa14.02□□□□□ -0.17
BRCA1-218ENST00000489037 TRBV5-4A0A0C4DH59 114 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 AGRPO00253 132 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 QSOX1O00391 747 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 HGSO14964 777 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-218ENST00000489037 TLX3O43711 291 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-218ENST00000489037 ITGA2BP08514 1039 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 GSTM1P09488 218 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 SLC35G4P0C7Q5 338 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 TPSB2P20231 275 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 PSMA3P25788 255 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 CSTF2P33240 577 aaKnown RBP eCLIP14.01□□□□□ -0.17
BRCA1-218ENST00000489037 COILP38432 576 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-218ENST00000489037 EIF2S3P41091 472 aaKnown RBP14.01□□□□□ -0.17
BRCA1-218ENST00000489037 GRIA1P42261 906 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 VPS41P49754 854 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 GNG11P61952 73 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 GSTM4Q03013 218 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 CCDC173Q0VFZ6 552 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 GPS1Q13098 491 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 NFE2L1Q14494 772 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 KRT33BQ14525 404 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 ITIH4Q14624 930 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 TPSAB1Q15661 275 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 TMEM164Q5U3C3 297 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 METRNLQ641Q3 311 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 WDR74Q6RFH5 385 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-218ENST00000489037 AFTPHQ6ULP2 937 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 PLXDC1Q8IUK5 500 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 CFAP206Q8IYR0 622 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 HM13Q8TCT9 377 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 HDAC10Q969S8 669 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 LINC00615Q96LM1 132 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-218ENST00000489037 CCDC74BQ96LY2 380 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 CCM2Q9BSQ5 444 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 IL22Q9GZX6 179 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 SMARCAL1Q9NZC9 954 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 ZNF624Q9P2J8 865 aaPredicted RBP14.01□□□□□ -0.17
BRCA1-218ENST00000489037 FAM8A1Q9UBU6 413 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 PSMD13Q9UNM6 376 aa14.01□□□□□ -0.17
BRCA1-218ENST00000489037 ADAMTS20P59510 1910 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14□□□□□ -0.17
BRCA1-218ENST00000489037 A0A087WV48 116 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 IGHV5-10-1A0A0J9YXX1 117 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 C17orf113A0A1B0GUU1 675 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 CCDC162PA2VCL2 907 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 PRR19A6NJB7 356 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 OR52A4PA6NMU1 304 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 PHF2O75151 1096 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 AP2A2O94973 939 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 GOT2P00505 430 aaKnown RBP14□□□□□ -0.17
BRCA1-218ENST00000489037 HOXB3P14651 431 aaPredicted RBP14□□□□□ -0.17
BRCA1-218ENST00000489037 BRAFP15056 766 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 NSG1P42857 185 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 ABCG1P45844 678 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 PRLHRP49683 370 aa14□□□□□ -0.17
BRCA1-218ENST00000489037 CDKN1CP49918 316 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms