RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 KCNA5P22460 613 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 FUT6P51993 359 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 EEF1A2Q05639 463 aaKnown RBP3.14□□□□□ -1.91
CD46-215ENST00000488596 RUNX1T1Q06455 604 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 CXCL9Q07325 125 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 MVPQ14764 893 aaKnown RBP3.14□□□□□ -1.91
CD46-215ENST00000488596 TMEM35AQ53FP2 167 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 OTUD3Q5T2D3 398 aaPredicted RBP3.14□□□□□ -1.91
CD46-215ENST00000488596 IRAK1BP1Q5VVH5 260 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 ZDHHC20Q5W0Z9 365 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 ALS2CLQ60I27 953 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 OR7E24Q6IFN5 339 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 FAM122CQ6P4D5 195 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 SPSB3Q6PJ21 355 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 ASB18Q6ZVZ8 466 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 INTS8Q75QN2 995 aaKnown RBP3.14□□□□□ -1.91
CD46-215ENST00000488596 ZNF534Q76KX8 674 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 LDB1Q86U70 411 aaPredicted RBP3.14□□□□□ -1.91
CD46-215ENST00000488596 SFR1Q86XK3 245 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 MCEMP1Q8IX19 187 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.14□□□□□ -1.91
CD46-215ENST00000488596 PM20D2Q8IYS1 436 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 GCSAMQ8N6F7 178 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 SYT2Q8N9I0 419 aaPredicted RBP3.14□□□□□ -1.91
CD46-215ENST00000488596 AVL9Q8NBF6 648 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 KCTD6Q8NC69 237 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 OR52I2Q8NH67 350 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 SPATA20Q8TB22 786 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 THAP6Q8TBB0 222 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 DNAAF4Q8WXU2 420 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 PTERQ96BW5 349 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 ZNF385AQ96PM9 386 aaKnown RBP3.14□□□□□ -1.91
CD46-215ENST00000488596 C1QTNF4Q9BXJ3 329 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 RTN4RQ9BZR6 473 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 KCNK15Q9H427 330 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 MBNL1Q9NR56 388 aaKnown RBP3.14□□□□□ -1.91
CD46-215ENST00000488596 TCP11L1Q9NUJ3 509 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 CPSF2Q9P2I0 782 aaKnown RBP3.14□□□□□ -1.91
CD46-215ENST00000488596 LARSQ9P2J5 1176 aaKnown RBP3.14□□□□□ -1.91
CD46-215ENST00000488596 KCNG2Q9UJ96 466 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 ZNF148Q9UQR1 794 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 CGNL1Q0VF96 1302 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 SCN5AQ14524 2016 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 LOC102723996A0A087X1L8 192 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 GPR75-ASB3A0A0A6YYF3 556 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 OR2M5A3KFT3 312 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 A6NL46 340 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 PRAC2D3DTV9 90 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 TMEM178BH3BS89 294 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 SLC16A5O15375 505 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 ZNHIT1O43257 154 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 TIMM44O43615 452 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 PLOD3O60568 738 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 KRT19P08727 400 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 DAOP14920 347 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 IL11P20809 199 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 TCEA1P23193 301 aaKnown RBP3.13□□□□□ -1.91
CD46-215ENST00000488596 DNASE1P24855 282 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 GABRA5P31644 462 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 COASYQ13057 564 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 PRPF4BQ13523 1007 aaKnown RBP3.13□□□□□ -1.91
CD46-215ENST00000488596 TMEM266Q2M3C6 531 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 STXBP5Q5T5C0 1151 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 C9orf57Q5W0N0 161 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 KRT79Q5XKE5 535 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 NAA16Q6N069 864 aaPredicted RBP3.13□□□□□ -1.91
CD46-215ENST00000488596 TRNP1Q6NT89 227 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 DENND5BQ6ZUT9 1274 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 Q75L30 129 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 ADIPOR2Q86V24 386 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 KMT5CQ86Y97 462 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 FBXO39Q8N4B4 442 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 GBGT1Q8N5D6 347 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 MINDY1Q8N5J2 469 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 MCUQ8NE86 351 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 TAS1R2Q8TE23 839 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 PTPMT1Q8WUK0 201 aaPredicted RBP3.13□□□□□ -1.91
CD46-215ENST00000488596 SORCS1Q8WY21 1168 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 SECISBP2LQ93073 1101 aaKnown RBP3.13□□□□□ -1.91
CD46-215ENST00000488596 CCDC34Q96HJ3 373 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 TTC14Q96N46 770 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 DACH2Q96NX9 599 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 SERINC2Q96SA4 455 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 SYT17Q9BSW7 474 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 SPATC1LQ9H0A9 340 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 GOLPH3LQ9H4A5 285 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 PSD3Q9NYI0 1048 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 RCC2Q9P258 522 aaKnown RBP3.13□□□□□ -1.91
CD46-215ENST00000488596 ZNF711Q9Y462 761 aa3.13□□□□□ -1.91
CD46-215ENST00000488596 TMEM184BQ9Y519 407 aaPredicted RBP3.13□□□□□ -1.91
CD46-215ENST00000488596 KAT6BQ8WYB5 2073 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 IGHV4OR15-8A0A075B7B6 117 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 PLSCR5A0PG75 271 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 OR5K3A6NET4 321 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 C5orf60A6NFR6 353 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 GLOD5A6NK44 160 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 TULP2O00295 520 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 EIF3DO15371 548 aaKnown RBP eCLIP3.12□□□□□ -1.91
CD46-215ENST00000488596 NDUFS4O43181 175 aa3.12□□□□□ -1.91
CD46-215ENST00000488596 WDR1O75083 606 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms