RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, human

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-208	ENST00000488571	CEP41	Q9BYV8	373 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	TRIM10	Q9UDY6	481 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	VPS4A	Q9UN37	437 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	ZNF711	Q9Y462	761 aa		11.13	□□□□□ -0.63
SNU13-208	ENST00000488571	AURKA	O14965	403 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	SEMA7A	O75326	666 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	CDK14	O94921	469 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	SLC4A1	P02730	911 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	MX2	P20592	715 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	IDS	P22304	550 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	CHAF1B	Q13112	559 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	NR1I3	Q14994	352 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	ANO6	Q4KMQ2	910 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	MSS51	Q4VC12	460 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	ATP13A5	Q4VNC0	1218 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	FIGN	Q5HY92	759 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	FHL5	Q5TD97	284 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	PAPD7	Q5XG87	772 aa	Known RBP	11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	PLD5	Q8N7P1	536 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	SIDT2	Q8NBJ9	832 aa	Known RBP	11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	UBXN4	Q92575	508 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	CXorf40B	Q96DE9	158 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	FCRL4	Q96PJ5	515 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	VPS35	Q96QK1	796 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	MAP3K3	Q99759	626 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	BPIFA3	Q9BQP9	254 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	REPIN1	Q9BWE0	567 aa	Known RBP	11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	GPR87	Q9BY21	358 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	GPR63	Q9BZJ6	419 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	PDE7B	Q9NP56	450 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	RAD18	Q9NS91	495 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	RARRES3	Q9UL19	164 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	NENF	Q9UMX5	172 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	MAP4K5	Q9Y4K4	846 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	SPO11	Q9Y5K1	396 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	MYO9A	B2RTY4	2548 aa		11.12	□□□□□ -0.63
SNU13-208	ENST00000488571	PROSC	O94903	275 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	EBLN1	P0CF75	366 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	PTPN4	P29074	926 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	PGD	P52209	483 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	CDK18	Q07002	472 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	PCSK7	Q16549	785 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	FILIP1L	Q4L180	1135 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	ALKBH5	Q6P6C2	394 aa	Known RBP	11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	CYB5D1	Q6P9G0	228 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	ZNF517	Q6ZMY9	492 aa	Predicted RBP	11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	SYVN1	Q86TM6	617 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	NT5DC3	Q86UY8	548 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	TRAPPC5	Q8IUR0	188 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	MAP7D3	Q8IWC1	876 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	SSC4D	Q8WTU2	575 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	THAP4	Q8WY91	577 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	SEC14L1	Q92503	715 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	RAPGEF5	Q92565	580 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	SYN2	Q92777	582 aa	Predicted RBP	11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	RNF157	Q96PX1	679 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	SLC25A23	Q9BV35	468 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	BPIFA1	Q9NP55	256 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	FGF21	Q9NSA1	209 aa		11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	BZW2	Q9Y6E2	419 aa	Known RBP	11.11	□□□□□ -0.63
SNU13-208	ENST00000488571	PCSK5	Q92824	1860 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.1	□□□□□ -0.63
SNU13-208	ENST00000488571		A0A1W2PQJ5	194 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	ARGFX	A6NJG6	315 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	MT-CYB	P00156	380 aa	Predicted RBP	11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	SERPING1	P05155	500 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	KDELR1	P24390	212 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	CA5A	P35218	305 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	PTGIR	P43119	386 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	CCL11	P51671	97 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	ACY1	Q03154	408 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	DMPK	Q09013	629 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	TMEM115	Q12893	351 aa	Predicted RBP	11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	GPS2	Q13227	327 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	ESPL1	Q14674	2120 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	SLC14A2	Q15849	920 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	RPE65	Q16518	533 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	PRR30	Q53SZ7	412 aa	Predicted RBP	11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	BPHL	Q86WA6	291 aa	Predicted RBP	11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	D2HGDH	Q8N465	521 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	SLC38A9	Q8NBW4	561 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	SPATA22	Q8NHS9	363 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	ADAMTS17	Q8TE56	1095 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	ZNF514	Q96K75	400 aa	Predicted RBP	11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	ZNF830	Q96NB3	372 aa	Predicted RBP	11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	OLFM3	Q96PB7	478 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	NAT10	Q9H0A0	1025 aa	Known RBP	11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	ING2	Q9H160	280 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	SLC25A51	Q9H1U9	297 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	PSMD13	Q9UNM6	376 aa		11.1	□□□□□ -0.63
SNU13-208	ENST00000488571	HIVEP3	Q5T1R4	2406 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	ITPR2	Q14571	2701 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	TLCD2	A6NGC4	264 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	C3orf70	A6NLC5	250 aa	Predicted RBP	11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	GPR39	O43194	453 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	CPNE3	O75131	537 aa	Known RBP	11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	CEACAM4	O75871	244 aa		11.09	□□□□□ -0.63
SNU13-208	ENST00000488571	NDST3	O95803	873 aa		11.09	□□□□□ -0.63

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