RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 TBATAQ96M53 351 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 LINC00052Q96N35 136 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 ILKAPQ9H0C8 392 aaPredicted RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 CYP3A43Q9HB55 503 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 MED9Q9NWA0 146 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 CUEDC1Q9NWM3 386 aaPredicted RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 NUDT5Q9UKK9 219 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 CNOT6Q9ULM6 557 aaKnown RBP6.3□□□□□ -1.4
SIK3-212ENST00000488337 USTQ9Y2C2 406 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 CBY1Q9Y3M2 126 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 IPPQ9Y573 584 aa6.3□□□□□ -1.4
SIK3-212ENST00000488337 METTL15A6NJ78 407 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 WDR64B1ANS9 1081 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 TRIM38O00635 465 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 TFECO14948 347 aaPredicted RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 MSH4O15457 936 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 BRINP1O60477 761 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 LPXNO60711 386 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 XYLBO75191 536 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 LRCH4O75427 683 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 PMPCBO75439 489 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 RASAL1O95294 804 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 IFNB1P01574 187 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 SNHG28P0DPA3 235 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 ADORA2AP29274 412 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 ATP5OP48047 213 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 CLK2P49760 499 aaKnown RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 SEPHS1P49903 392 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 GABARAPL2P60520 117 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 MPP1Q00013 466 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 ROR1Q01973 937 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 RIPPLY1Q0D2K3 151 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 SKIV2LQ15477 1246 aaKnown RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 GRK1Q15835 563 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 SLC27A4Q6P1M0 643 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 RBFAQ8N0V3 343 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 PARP16Q8N5Y8 322 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 ZNF557Q8N988 423 aaPredicted RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 LINC00116Q8NCU8 138 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 TRPV3Q8NET8 790 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 OR6M1Q8NGM8 313 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 CYP2W1Q8TAV3 490 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 ASZ1Q8WWH4 475 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 ATG4AQ8WYN0 398 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 SLC22A18Q96BI1 424 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 CCM2LQ9NUG4 571 aaPredicted RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 PCDHGB2Q9Y5G2 931 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 AP1M2Q9Y6Q5 423 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 COL16A1Q07092 1604 aaPredicted RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 FAM86B1E9PN63 330 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 TERTO14746 1132 aaKnown RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 TRIM24O15164 1050 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 GPR37O15354 613 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 SIGLEC6O43699 453 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 EDIL3O43854 480 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 PRKRAO75569 313 aaKnown RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 C2P06681 752 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 FAM86B2P0C5J1 330 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 JUNDP17535 347 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 CAPGP40121 348 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 CSKP41240 450 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 KYAT1Q16773 422 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 DCAF15Q66K64 600 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 LAIR2Q6ISS4 152 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 METTL23Q86XA0 190 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 CENPLQ8N0S6 344 aaPredicted RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 DPP10Q8N608 796 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 ARFGAP1Q8N6T3 406 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 IPMKQ8NFU5 416 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 NT5C1BQ96P26 610 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 NEDD4LQ96PU5 975 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 CCM2Q9BSQ5 444 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 CNPY3Q9BT09 278 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 SEBOXQ9HB31 216 aaPredicted RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 SARDHQ9UL12 918 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 DDX60LQ5H9U9 1706 aaKnown RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 NUP98P52948 1817 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 A8MXK9 166 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 SEC14L5O43304 696 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 B4GAT1O43505 415 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 TSC22D2O75157 780 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 TRIM3O75382 744 aaPredicted RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 OR2B3O76000 313 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 KLK3P07288 261 aaPredicted RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 KRT19P08727 400 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 ME2P23368 584 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 SERPINB10P48595 397 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 FAXCQ5TGI0 409 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 C16orf89Q6UX73 402 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 ZNF517Q6ZMY9 492 aaPredicted RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 SLC9B2Q86UD5 537 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 TIGD4Q8IY51 512 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 SLC22A17Q8WUG5 538 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 E2F7Q96AV8 911 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 TRIM43Q96BQ3 446 aaPredicted RBP6.29□□□□□ -1.4
SIK3-212ENST00000488337 PTERQ96BW5 349 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 NXNL1Q96CM4 212 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 NXPE2Q96DL1 559 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 PAFAH2Q99487 392 aa6.29□□□□□ -1.4
SIK3-212ENST00000488337 MECRQ9BV79 373 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms