RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 RAPSNQ13702 412 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 SEMA3AQ14563 771 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 TRIP4Q15650 581 aaPredicted RBP14.03□□□□□ -0.16
COL16A1-214ENST00000488128 CCL15Q16663 113 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 DUSP28Q4G0W2 176 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 ATP6AP1LQ52LC2 224 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 COLEC12Q5KU26 742 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 RBM48Q5RL73 367 aaKnown RBP14.03□□□□□ -0.16
COL16A1-214ENST00000488128 UBE2UQ5VVX9 321 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 GPR142Q7Z601 462 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 ARRDC4Q8NCT1 418 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 PAPD5Q8NDF8 572 aaKnown RBP14.03□□□□□ -0.16
COL16A1-214ENST00000488128 SCAMP5Q8TAC9 235 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 PROKR1Q8TCW9 393 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 FAR1Q8WVX9 515 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 HDAC2Q92769 488 aaKnown RBP14.03□□□□□ -0.16
COL16A1-214ENST00000488128 LRRC3Q9BY71 257 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 ZNF225Q9UK10 706 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 COL1A2P08123 1366 aa14.03□□□□□ -0.16
COL16A1-214ENST00000488128 LOC100130705A0A1B0GUX0 176 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 J3KR12 359 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 GSTA4O15217 222 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 DFNA5O60443 496 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 MATN4O95460 622 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 SMIM10L2AP0DMW4 78 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 SMIM10L2BP0DMW5 78 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 PFKLP17858 780 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 COPZ1P61923 177 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 SYT16Q17RD7 645 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 NOTUMQ6P988 496 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 FAM126BQ8IXS8 530 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 OR13C4Q8NGS5 318 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 SLC9A7Q96T83 725 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 CTRCQ99895 268 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 HGH1Q9BTY7 390 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 C6orf62Q9GZU0 229 aaPredicted RBP14.02□□□□□ -0.16
COL16A1-214ENST00000488128 RASSF1Q9NS23 344 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 LEF1Q9UJU2 399 aaPredicted RBP14.02□□□□□ -0.16
COL16A1-214ENST00000488128 RNF112Q9ULX5 631 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 PCDHGA3Q9Y5H0 932 aa14.02□□□□□ -0.16
COL16A1-214ENST00000488128 SNPHO15079 494 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 PRKD3O94806 890 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 RAP2AP10114 183 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 UMPSP11172 480 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 PCMT1P22061 227 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 POLD2P49005 469 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 SLC10A7Q0GE19 358 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 SCAPQ12770 1279 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 SNX17Q15036 470 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 TTC23Q5W5X9 447 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 SYVN1Q86TM6 617 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 AKAP14Q86UN6 197 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 PHACTR4Q8IZ21 702 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 FBXO39Q8N4B4 442 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 FAM83FQ8NEG4 500 aaPredicted RBP14.02□□□□□ -0.17
COL16A1-214ENST00000488128 NPLOC4Q8TAT6 608 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 NCLNQ969V3 563 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 BARD1Q99728 777 aaKnown RBP14.02□□□□□ -0.17
COL16A1-214ENST00000488128 PSD2Q9BQI7 771 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 IKZF5Q9H5V7 419 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 ADGRE2Q9UHX3 823 aa14.02□□□□□ -0.17
COL16A1-214ENST00000488128 KATNA1O75449 491 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 OR4F21O95013 312 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 S100A1P23297 94 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 DNAJB1P25685 340 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 CA8P35219 290 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 PIK3CGP48736 1102 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 ISL1P61371 349 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 TIAL1Q01085 375 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL16A1-214ENST00000488128 LDLRAD1Q5T700 205 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 LAIR1Q6GTX8 287 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 PAQR3Q6TCH7 311 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 DET1Q7L5Y6 550 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 MILR1Q7Z6M3 343 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 TINF2Q9BSI4 451 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 AIG1Q9NVV5 245 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 SCN4AP35499 1836 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 ARVCFO00192 962 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 PRMT5O14744 637 aaPredicted RBP14.01□□□□□ -0.17
COL16A1-214ENST00000488128 MATN3O15232 486 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 DIRAS1O95057 198 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 ANGPTL1O95841 491 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 CHRNA1P02708 482 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 ANXA6P08133 673 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 G6PDP11413 515 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 CCNCP24863 283 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 CD40LGP29965 261 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 CBX2Q14781 532 aaPredicted RBP14.01□□□□□ -0.17
COL16A1-214ENST00000488128 NPTX1Q15818 432 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 DGUOKQ16854 277 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 P2RY8Q86VZ1 359 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 HID1Q8IV36 788 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 OR52B6Q8NGF0 335 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 OR6Q1Q8NGQ2 317 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 CALML6Q8TD86 181 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 PTCD2Q8WV60 388 aaKnown RBP14.01□□□□□ -0.17
COL16A1-214ENST00000488128 BRI3BPQ8WY22 251 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 GAD1Q99259 594 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 HACD3Q9P035 362 aa14.01□□□□□ -0.17
COL16A1-214ENST00000488128 VAPAQ9P0L0 249 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms